RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 RARRES1P49788 294 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FXR1P51114 621 aaKnown RBP eCLIP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF157P51786 506 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NPEPPSP55786 919 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KRTAP10-10P60014 251 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NKX3-2P78367 333 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LRMPQ12912 555 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MPP3Q13368 585 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF169Q14929 603 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TCEA2Q15560 299 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CCDC6Q16204 474 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CR1LQ2VPA4 569 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZMAT1Q5H9K5 638 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SLC6A19Q695T7 634 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CAPRIN2Q6IMN6 1127 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ADAM5Q6NVV9 412 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM198BQ6UWH4 519 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PI16Q6UXB8 463 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CYP2R1Q6VVX0 501 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PLEKHM2Q8IWE5 1019 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GPR135Q8IZ08 494 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CYB5D2Q8WUJ1 264 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CFHR4Q92496 578 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MIEF2Q96C03 454 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 VCPIP1Q96JH7 1222 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 UHRF2Q96PU4 802 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM193BQ96PV7 902 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DPH2Q9BQC3 489 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CHRDL1Q9BU40 450 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CARD11Q9BXL7 1154 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GPR87Q9BY21 358 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MKRN2Q9H000 416 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SPRTNQ9H040 489 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM39AQ9NV64 488 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TUBA8Q9NY65 449 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DLL3Q9NYJ7 618 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KIAA1522Q9P206 1035 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SLC17A6Q9P2U8 582 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ADAMTS1Q9UHI8 967 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PUF60Q9UHX1 559 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ICAM5Q9UMF0 924 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SH3BP1Q9Y3L3 701 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ATXN2Q99700 1313 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PIPSLA2A3N6 862 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 KLRG2A4D1S0 409 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PMS2P1A4D2B8 440 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CD8B2A6NJW9 211 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LINC01548A6NM66 108 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GOLGA6L6A8MZA4 724 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ARHGAP6O43182 974 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SLC28A2O43868 658 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TNFRSF21O75509 655 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 KNG1P01042 644 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CD1AP06126 327 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NME2P22392 152 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 STAT5AP42229 794 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MMP13P45452 471 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LMO4P61968 165 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 HTRA4P83105 476 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SMAD3P84022 425 aaKnown RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZXDBP98169 803 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 EIF4EBP2Q13542 120 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SMAD2Q15796 467 aaKnown RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PXDC1Q5TGL8 231 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ABHD17BQ5VST6 288 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 WWC2Q6AWC2 1192 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SPINK14Q6IE38 97 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PRPF40BQ6NWY9 871 aaKnown RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 C16orf46Q6P387 395 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 DGLUCYQ7Z3D6 616 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 IRF2BP2Q7Z5L9 587 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 DAAM2Q86T65 1068 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 DCP2Q8IU60 420 aaKnown RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NAT16Q8N8M0 369 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ABTB2Q8N961 1025 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 BBXQ8WY36 941 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SARAFQ96BY9 339 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ARMC5Q96C12 935 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF594Q96JF6 807 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TMEM87BQ96K49 555 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 UROC1Q96N76 676 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MEIS3Q99687 375 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 HINFPQ9BQA5 517 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PLA2G12AQ9BZM1 189 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GFRA4Q9GZZ7 299 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 VPS16Q9H269 839 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ABCB6Q9NP58 842 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AP5S1Q9NUS5 200 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SELENONQ9NZV5 590 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ANKFY1Q9P2R3 1169 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TJP2Q9UDY2 1190 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PCDHA4Q9UN74 947 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AFG3L2Q9Y4W6 797 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ITGB4P16144 1822 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MAST3O60307 1309 aa-0.16□□□□□ -2.44
RNU6-1238P-201ENST00000517215 DHX57Q6P158 1386 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LACTBL1A8MY62 500 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TRIM24O15164 1050 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PCSK2P16519 638 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 EPHB2P29323 1055 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms