RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TSHZ1Q6ZSZ6 1077 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 MXRA8Q9BRK3 442 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 SDF4Q9BRK5 362 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 C11orf84Q9BUA3 381 aaPredicted RBP16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 LMAN2LQ9H0V9 348 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GLT8D2Q9H1C3 349 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RIC8AQ9NPQ8 531 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 C5orf67F2Z3F1 127 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 M0QZ92 97 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ADCY7P51828 1080 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 MRPS6P82932 125 aaKnown RBP16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 COL9A3Q14050 684 aaPredicted RBP16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RTN1Q16799 776 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 MARCH8Q5T0T0 291 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 IER5Q5VY09 327 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 WWC2Q6AWC2 1192 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 DNAJB3Q8WWF6 145 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 KCNH7Q9NS40 1196 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 SQORQ9Y6N5 450 aa16.69■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ZBTB43O43298 467 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NCK2O43639 380 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 SLC26A2P50443 739 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RCAN1P53805 252 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 AP3B2Q13367 1082 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TCEAL5Q5H9L2 206 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NEK9Q8TD19 979 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PABPC5Q96DU9 382 aaKnown RBP16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FTHL17Q9BXU8 183 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 EPHX3Q9H6B9 360 aa16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RC3H2Q9HBD1 1191 aaKnown RBP16.68■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 INSRRP14616 1297 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PLA2G5P39877 138 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ACTR2P61160 394 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 IGBP1P78318 339 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 KRT32Q14532 448 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 COL19A1Q14993 1142 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CEP55Q53EZ4 464 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PLPPR4Q7Z2D5 763 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CLP1Q92989 425 aaKnown RBP16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PCYT2Q99447 389 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ANO3Q9BYT9 981 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FAM49AQ9H0Q0 323 aaPredicted RBP16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RAPGEFL1Q9UHV5 662 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 HCN4Q9Y3Q4 1203 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TRPV2Q9Y5S1 764 aa16.67■□□□□ 0.26
SCARNA20.5-201ENST00000516991 MYO7AQ13402 2215 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 STXBP3O00186 592 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ENPP3O14638 875 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 BMPR1AP36894 532 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 SREBF1P36956 1147 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NIPA1Q7RTP0 329 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NPAS4Q8IUM7 802 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PLVAPQ9BX97 442 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 BARHL2Q9NY43 387 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ARIH1Q9Y4X5 557 aaPredicted RBP16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PCDHA2Q9Y5H9 948 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ATG2AQ2TAZ0 1938 aa16.66■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GPR37L1O60883 481 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CD52P31358 61 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 STAT5BP51692 787 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FUT2Q10981 343 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 PLCB4Q15147 1175 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TYW1BQ6NUM6 668 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CMTR2Q8IYT2 770 aaKnown RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 GJD3Q8N144 294 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ZNF689Q96CS4 500 aaPredicted RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 FAM122AQ96E09 287 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 AGO3Q9H9G7 860 aaKnown RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 IGSF9BQ9UPX0 1349 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 KDM3AQ9Y4C1 1321 aa16.65■□□□□ 0.26
SCARNA20.5-201ENST00000516991 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
SCARNA20.5-201ENST00000516991 SMIM35A0A1B0GVV1 85 aa16.64■□□□□ 0.25
SCARNA20.5-201ENST00000516991 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
SCARNA20.5-201ENST00000516991 SMCO2A6NFE2 343 aa16.64■□□□□ 0.25
SCARNA20.5-201ENST00000516991 PI4K2BG5E9Z4 385 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms