RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 A6NHS1 94 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 EIF1AYO14602 144 aaKnown RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PRPF3O43395 683 aaKnown RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ADCY3O60266 1144 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DTNBO60941 627 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 COBLO75128 1261 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CFBP00751 764 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CALML3P27482 149 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ADORA2AP29274 412 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GNA15P30679 374 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SSRP1Q08945 709 aaKnown RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SCRN1Q12765 414 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GRB14Q14449 540 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 C4orf17Q53FE4 359 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MUM1L1Q5H9M0 696 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FBXO46Q6PJ61 603 aaPredicted RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RNF207Q6ZRF8 634 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NT5DC4Q86YG4 428 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MCF2L2Q86YR7 1114 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TRIM22Q8IYM9 498 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ABRAQ8N0Z2 381 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NPLOC4Q8TAT6 608 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SOCS4Q8WXH5 440 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TBC1D5Q92609 795 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PHKBQ93100 1093 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RNF34Q969K3 372 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZSCAN31Q96LW9 406 aaPredicted RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC26A6Q9BXS9 759 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MCOLN1Q9GZU1 580 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ABCB11O95342 1321 aa6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 BAZ2BQ9UIF8 2168 aaKnown RBP6.67□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NFIBO00712 420 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 OPLAHO14841 1288 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PPP1R11O60927 126 aaPredicted RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CDKL5O76039 1030 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 LARGE1O95461 756 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RPLP1P05386 114 aaKnown RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ELNP15502 786 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 IFNAR1P17181 557 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GRK4P32298 578 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GPC1P35052 558 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MCM2P49736 904 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RPS6P62753 249 aaKnown RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FANCCQ00597 558 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CNTN2Q02246 1040 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RAD51AP2Q09MP3 1159 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NTRK3Q16288 839 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC9C1Q4G0N8 1177 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 HEATR3Q7Z4Q2 680 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CYP4X1Q8N118 509 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FBF1Q8TES7 1133 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 USP6NLQ92738 828 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 INSM2Q96T92 566 aaPredicted RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 A1CFQ9NQ94 594 aaKnown RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 AK5Q9Y6K8 562 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CNTNAP5Q8WYK1 1306 aa6.66□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SMCO2A6NFE2 343 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TGFBR3LH3BV60 316 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GCOM1H8Y6P7 765 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DEXIO95424 95 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 POLR2MP0CAP2 368 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 XRCC5P13010 732 aaKnown RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SCG2P13521 617 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PHKA2P46019 1235 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NAPAP54920 295 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 UBXN2AP68543 259 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CCL14Q16627 93 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 HIF1AQ16665 826 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PFKFB3Q16875 520 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZNF792Q3KQV3 632 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PRAMEF19Q5SWL8 479 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MFSD14CQ5VZR4 134 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 WWC2Q6AWC2 1192 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FCHSD1Q86WN1 690 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CCDC83Q8IWF9 413 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MEIOBQ8N635 442 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SMARCC2Q8TAQ2 1214 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SYTL5Q8TDW5 730 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SH3TC2Q8TF17 1288 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CUL5Q93034 780 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GTF3C6Q969F1 213 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SUSD3Q96L08 255 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 APBA2Q99767 749 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TSEN34Q9BSV6 310 aaKnown RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RNF26Q9BY78 433 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DNAJC25Q9H1X3 360 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PSTPIP2Q9H939 334 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SH2B1Q9NRF2 756 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CYP39A1Q9NYL5 469 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ORC3Q9UBD5 711 aaPredicted RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ADD3Q9UEY8 706 aaKnown RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DIS3Q9Y2L1 958 aaKnown RBP6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RLFQ13129 1914 aa6.65□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PFASO15067 1338 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms