RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CUL4AQ13619 759 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 LRCH2Q5VUJ6 765 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 B3GNT9Q6UX72 402 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 RPUSD2Q8IZ73 545 aaKnown RBP12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 DHX38Q92620 1227 aaKnown RBP12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 GJA10Q969M2 543 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 WNT8AQ9H1J5 351 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 KCNMB3Q9NPA1 279 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 DOCK5Q9H7D0 1870 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 BACH1O14867 736 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 PSAPP07602 524 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 CKBP12277 381 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 INSRRP14616 1297 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 ATP4AP20648 1035 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 MARK3P27448 753 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 GJB2P29033 226 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 SFNP31947 248 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 PLCB4Q15147 1175 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 TRIM71Q2Q1W2 868 aaKnown RBP12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 CCDC60Q8IWA6 550 aaPredicted RBP12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 HAS1Q92839 578 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 SCLYQ96I15 445 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
SCARNA20-201ENST00000516768 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 WDR64B1ANS9 1081 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 HBP1O60381 514 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 PARNO95453 639 aaKnown RBP12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 FGBP02675 491 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 JAK3P52333 1124 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 GPNMBQ14956 572 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 ZNF365Q70YC5 407 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 LMBR1Q8WVP7 490 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 WNT8BQ93098 351 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 UNC45AQ9H3U1 944 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 SMC3Q9UQE7 1217 aa12.59□□□□□ -0.39
SCARNA20-201ENST00000516768 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 ACRP10323 421 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 SELPP16109 830 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 RFC2P35250 354 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 GRIK4Q16099 956 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 ZNF618Q5T7W0 954 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 NOSTRINQ8IVI9 506 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 SLFN12Q8IYM2 578 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 ATP8B4Q8TF62 1192 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 MTMR9Q96QG7 549 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 GABBR1Q9UBS5 961 aa12.58□□□□□ -0.4
SCARNA20-201ENST00000516768 WNT7AO00755 349 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 MARCH6O60337 910 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 CAND2O75155 1236 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 PFKMP08237 780 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 KLRC1P26715 233 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 THPOP40225 353 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 TRAF7Q6Q0C0 670 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 LRRC8DQ7L1W4 858 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 MIER3Q7Z3K6 550 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 CKAP2LQ8IYA6 745 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 SNX21Q969T3 373 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 NRBP2Q9NSY0 501 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 PCDHA12Q9UN75 941 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 TRIP12Q14669 1992 aaPredicted RBP12.57□□□□□ -0.4
SCARNA20-201ENST00000516768 LTBP2Q14767 1821 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms