RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 RNF4P78317 190 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 SIM1P81133 766 aaPredicted RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 LEXMQ3ZCV2 418 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 PP632Q6XCG6 107 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 DCP2Q8IU60 420 aaKnown RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 ANKRD35Q8N283 1001 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 MIEF2Q96C03 454 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 TOE1Q96GM8 510 aaKnown RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 FCRL3Q96P31 734 aaPredicted RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 MPHOSPH9Q99550 1183 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 GPR87Q9BY21 358 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 KLK15Q9H2R5 256 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 RTN4Q9NQC3 1192 aaKnown RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 ASH2LQ9UBL3 628 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 NOVA2Q9UNW9 492 aaKnown RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 TRIP12Q14669 1992 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 MANSC4A6NHS7 340 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 SUPT5HO00267 1087 aaKnown RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 PPEF2O14830 753 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 PPFIA4O75335 1185 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 TADA3O75528 432 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 FUCA1P04066 466 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 CHGBP05060 677 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 GSNP06396 782 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 GBP1P32455 592 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZMAT1Q5H9K5 638 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 UBAP2Q5T6F2 1119 aaKnown RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 C1QL3Q5VWW1 255 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 NXPE4Q6UWF7 544 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 HTR3DQ70Z44 454 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ARRDC4Q8NCT1 418 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZNF512BQ96KM6 892 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 GATA5Q9BWX5 397 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 CEP44Q9C0F1 390 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 SPRTNQ9H040 489 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 AP5M1Q9H0R1 490 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 BHMT2Q9H2M3 363 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 MSL2Q9HCI7 577 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 KCND1Q9NSA2 647 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 PPP4R2Q9NY27 417 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ELOVL5Q9NYP7 299 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 DTLQ9NZJ0 730 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ARPP21Q9UBL0 812 aaPredicted RBP0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZMIZ1Q9ULJ6 1067 aa0.36□□□□□ -2.35
RNU6-542P-201ENST00000516405 COL2A1P02458 1487 aaPredicted RBP0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 H0Y8X5 98 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 EIF1AYO14602 144 aaKnown RBP0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 RGS13O14921 159 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 ESRRBO95718 433 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 ALPLP05186 524 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 HKR1P10072 659 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 IFNGR1P15260 489 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 LAG3P18627 525 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 LMOD1P29536 600 aaPredicted RBP0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 TOP3AQ13472 1001 aaPredicted RBP0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 LAMB3Q13751 1172 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 SLC9A4Q6AI14 798 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 ARHGEF19Q8IW93 802 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 STPG3Q8N7X2 389 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 CASKIN2Q8WXE0 1202 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 SEC14L1Q92503 715 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 PGBD4Q96DM1 585 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 MYEOVQ96EZ4 313 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 MNTQ99583 582 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 YIPF4Q9BSR8 244 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 ALOXE3Q9BYJ1 711 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 PPP1R12CQ9BZL4 782 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 SLCO5A1Q9H2Y9 848 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 KLHL3Q9UH77 587 aa0.35□□□□□ -2.35
RNU6-542P-201ENST00000516405 IGKV6D-41A0A0C4DH26 115 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 TMEM200CA6NKL6 621 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 ADAM10O14672 748 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 TOP3BO95985 862 aaKnown RBP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 IL18BPO95998 194 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 NEFLP07196 543 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 SNRPB2P08579 225 aaKnown RBP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 KELP23276 732 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 POLD1P28340 1107 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 CXCR3P49682 368 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 RARRES1P49788 294 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 HNRNPA3P51991 378 aaKnown RBP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 CACNA2D1P54289 1103 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM189BP81408 668 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 SAFB2Q14151 953 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZNF169Q14929 603 aaPredicted RBP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 CDCA8Q53HL2 280 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 AMER1Q5JTC6 1135 aaPredicted RBP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 LARP4Q71RC2 724 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 CUZD1Q86UP6 607 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 SHCBP1Q8NEM2 672 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 STK32AQ8WU08 396 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 POM121Q96HA1 1249 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 GP6Q9HCN6 339 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 DKK2Q9UBU2 259 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZFP69BQ9UJL9 534 aa0.34□□□□□ -2.36
RNU6-542P-201ENST00000516405 PIPSLA2A3N6 862 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 MAN2B1O00754 1011 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLC26A4O43511 780 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 EYA4O95677 639 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms