RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PLAGL2Q9UPG8 496 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 CDY2AQ9Y6F7 541 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 MBLAC1A4D2B0 266 aaPredicted RBP18.11■□□□□ 0.49
LMNA-223ENST00000515459 E7EWF7 191 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 LINC01565O15544 149 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 ATP9AO75110 1047 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 RPLP2P05387 115 aaKnown RBP18.11■□□□□ 0.49
LMNA-223ENST00000515459 KCNA2P16389 499 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 KIF5BP33176 963 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
LMNA-223ENST00000515459 ADAM15Q13444 863 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 MARCH8Q5T0T0 291 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 RNF135Q8IUD6 432 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 CTCFLQ8NI51 663 aaPredicted RBP18.11■□□□□ 0.49
LMNA-223ENST00000515459 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 GLG1Q92896 1179 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 SMARCAD1Q9H4L7 1026 aa18.11■□□□□ 0.49
LMNA-223ENST00000515459 ZNF318Q5VUA4 2279 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 LOXHD1Q8IVV2 1947 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 GSTTP1A0A1W2PQM5 241 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 STXBP3O00186 592 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 NDUFV1P49821 464 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 MRPS6P82932 125 aaKnown RBP18.1■□□□□ 0.49
LMNA-223ENST00000515459 PTH1RQ03431 593 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 CAMK1Q14012 370 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 NAALADL2Q58DX5 795 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 CMTR2Q8IYT2 770 aaKnown RBP18.1■□□□□ 0.49
LMNA-223ENST00000515459 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
LMNA-223ENST00000515459 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
LMNA-223ENST00000515459 SQORQ9Y6N5 450 aa18.1■□□□□ 0.49
LMNA-223ENST00000515459 RRN3P2A6NIE6 340 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 DDAH1O94760 285 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 ITGB5P18084 799 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 CD52P31358 61 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 ANTXR2P58335 489 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 IGBP1P78318 339 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 IER5Q5VY09 327 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 LZTS2Q9BRK4 669 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
LMNA-223ENST00000515459 MAFGO15525 162 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 EYA4O95677 639 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 ITGB1P05556 798 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 GSPT1P15170 499 aaKnown RBP18.08■□□□□ 0.48
LMNA-223ENST00000515459 MTMR1Q13613 665 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.48
LMNA-223ENST00000515459 NPAS4Q8IUM7 802 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 LINC01599Q8WXQ3 324 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 EDAQ92838 391 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 MYL10Q9BUA6 226 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 FAM49AQ9H0Q0 323 aaPredicted RBP18.08■□□□□ 0.48
LMNA-223ENST00000515459 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 PKD2L1Q9P0L9 805 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 UBIAD1Q9Y5Z9 338 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 C5orf42Q9H799 3197 aa18.08■□□□□ 0.48
LMNA-223ENST00000515459 M0QZ92 97 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 STAG3L1P0CL83 205 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 INSRRP14616 1297 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 DNAJB1P25685 340 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
LMNA-223ENST00000515459 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 KLHL23Q8NBE8 558 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 SPPL3Q8TCT6 385 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 TNPO1Q92973 898 aaKnown RBP18.07■□□□□ 0.48
LMNA-223ENST00000515459 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
LMNA-223ENST00000515459 TECTAO75443 2155 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 PLXNA4Q9HCM2 1894 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 SPDYE3A6NKU9 549 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 CHMLP26374 656 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 GNAQP50148 359 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
LMNA-223ENST00000515459 BMP8AQ7Z5Y6 402 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 ADGRD2Q7Z7M1 963 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 SMRP1Q8NCR6 262 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 POF1BQ8WVV4 589 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 JPH1Q9HDC5 661 aaPredicted RBP18.06■□□□□ 0.48
LMNA-223ENST00000515459 CLEC1BQ9P126 229 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 PADI3Q9ULW8 664 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 TRPV2Q9Y5S1 764 aa18.06■□□□□ 0.48
LMNA-223ENST00000515459 IGSF9BQ9UPX0 1349 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 SCG2P13521 617 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 TMEM62Q0P6H9 643 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 COASYQ13057 564 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 PAK2Q13177 524 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 SRBD1Q8N5C6 995 aaKnown RBP18.05■□□□□ 0.48
LMNA-223ENST00000515459 PCYT2Q99447 389 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 JADE2Q9NQC1 790 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 TRPC6Q9Y210 931 aa18.05■□□□□ 0.48
LMNA-223ENST00000515459 NRIP1P48552 1158 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms