RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FMO2Q99518 471 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 PLA2G12BQ9BX93 195 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 VCXQ9H320 206 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.17
SMAD1-215ENST00000515385 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 ATP6V0A2Q9Y487 856 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 ATP8B3O60423 1300 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.18
SMAD1-215ENST00000515385 CHD4Q14839 1912 aa13.96□□□□□ -0.18
SMAD1-215ENST00000515385 KRIT1O00522 736 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 RGS16O15492 202 aaPredicted RBP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 DDAH1O94760 285 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 MBD4O95243 580 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 BAG3O95817 575 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 KRT16P08779 473 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 GNAZP19086 355 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 FLT3P36888 993 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 DNA2P51530 1060 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 RNASE9P60153 205 aaKnown RBP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 IFIT5Q13325 482 aaKnown RBP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TAOK1Q7L7X3 1001 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TSPAN18Q96SJ8 248 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 FAM167BQ9BTA0 163 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 RXFP1Q9HBX9 757 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 SPATA31A3Q5VYP0 1347 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 MYH6P13533 1939 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 SPDYE3A6NKU9 549 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ZPR1O75312 459 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ATP5HO75947 161 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 CDC25CP30307 473 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 CUL3Q13618 768 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 PARP6Q2NL67 630 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 DENND2CQ68D51 928 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ANO7Q6IWH7 933 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 NEK9Q8TD19 979 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 AK8Q96MA6 479 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TRAPPC9Q96Q05 1148 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 GORASP1Q9BQQ3 440 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 PABPC3Q9H361 631 aaKnown RBP13.95□□□□□ -0.18
SMAD1-215ENST00000515385 WDR35Q9P2L0 1181 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 TNKSO95271 1327 aa13.95□□□□□ -0.18
SMAD1-215ENST00000515385 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 GJB6O95452 261 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 CCNB1P14635 433 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 PHKG2P15735 406 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 ACADSP16219 412 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 PCK1P35558 622 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 CCDC15Q0P6D6 951 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 TSNAXIP1Q2TAA8 658 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 PRCCQ92733 491 aaPredicted RBP13.94□□□□□ -0.18
SMAD1-215ENST00000515385 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
SMAD1-215ENST00000515385 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
SMAD1-215ENST00000515385 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 RNF8O76064 485 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 CSF1RP07333 972 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 CALB2P22676 271 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 ITGA6P23229 1130 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 ASIC1P78348 528 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 KLC1Q07866 573 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 STK4Q13043 487 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 CLUL1Q15846 466 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 B4GALNT2Q8NHY0 566 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 SEMA6BQ9H3T3 888 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 RNPEPL1Q9HAU8 725 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
SMAD1-215ENST00000515385 PACSIN2Q9UNF0 486 aaPredicted RBP13.94□□□□□ -0.18
SMAD1-215ENST00000515385 ATP8A1Q9Y2Q0 1164 aa13.94□□□□□ -0.18
SMAD1-215ENST00000515385 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 MYH7BA7E2Y1 1941 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 GSTA2P09210 222 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 SCG2P13521 617 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 PMS2P54278 862 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
SMAD1-215ENST00000515385 PLS1Q14651 629 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 NUGGCQ68CJ6 796 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 SESTD1Q86VW0 696 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 FAM81AQ8TBF8 368 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
SMAD1-215ENST00000515385 DDX47Q9H0S4 455 aaKnown RBP13.93□□□□□ -0.18
SMAD1-215ENST00000515385 TXLNGQ9NUQ3 528 aa13.93□□□□□ -0.18
SMAD1-215ENST00000515385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms