RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 CAVIN3Q969G5 261 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 KIF13BQ9NQT8 1826 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 CES2O00748 559 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 NCK2O43639 380 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 EPHB4P54760 987 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 ICA1Q05084 483 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 NNTQ13423 1086 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 PRR16Q569H4 304 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 MEI1Q5TIA1 1274 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
SNX2-213ENST00000514949 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
SNX2-213ENST00000514949 A0A087X0T9 212 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 A0A0U1RQG5 324 aaPredicted RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 PIK3CDO00329 1044 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 FAM228BP0C875 321 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 KLRC1P26715 233 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 CXCR5P32302 372 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 CASP5P51878 434 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 PSMC6P62333 389 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 CACNB1Q02641 598 aaPredicted RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 RAD51AP2Q09MP3 1159 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 KLHL30Q0D2K2 578 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 IRF2BP2Q7Z5L9 587 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 FBXO11Q86XK2 927 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 GSPT2Q8IYD1 628 aaKnown RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 GOLGA6L1Q8N7Z2 621 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 SH3GL2Q99962 352 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 REEP2Q9BRK0 252 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 TMX4Q9H1E5 349 aaPredicted RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 ARMCX3Q9UH62 379 aaPredicted RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 HDAC9Q9UKV0 1011 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 VAV3Q9UKW4 847 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 ZNF646O15015 1829 aaPredicted RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 ATRNL1Q5VV63 1379 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 GOLGA6BA6NDN3 693 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 FAM86B1E9PN63 330 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 BUB1O43683 1085 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 FAM86B2P0C5J1 330 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 ASIC2Q16515 512 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 DACT2Q5SW24 774 aa19.24■□□□□ 0.67
SNX2-213ENST00000514949 RBM12Q9NTZ6 932 aaKnown RBP19.24■□□□□ 0.67
SNX2-213ENST00000514949 COL11A2P13942 1736 aaPredicted RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 SPDYE3A6NKU9 549 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 G3V3G9 751 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SLC16A3O15427 465 aaKnown RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 CALUO43852 315 aaPredicted RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 PALMO75781 387 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 PRKCIP41743 596 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SF3B2Q13435 895 aaKnown RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 RAPGEF1Q13905 1077 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SYDE2Q5VT97 1194 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 ALS2CLQ60I27 953 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 METTL14Q9HCE5 456 aaKnown RBP19.23■□□□□ 0.67
SNX2-213ENST00000514949 GDF3Q9NR23 364 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SERPINA10Q9UK55 444 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 EP400Q96L91 3159 aa19.23■□□□□ 0.67
SNX2-213ENST00000514949 SHOX2O60902 331 aaPredicted RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 NDUFB10O96000 172 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 AFPP02771 609 aaKnown RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 EPS15P42566 896 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 SFR1Q86XK3 245 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 OLFML3Q9NRN5 406 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 TYW1Q9NV66 732 aaKnown RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 ADAMTS1Q9UHI8 967 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 COL2A1P02458 1487 aaPredicted RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 GTPBP10A4D1E9 387 aaKnown RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 OPLAHO14841 1288 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 MSH4O15457 936 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 EPB41P11171 864 aaKnown RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 UCHL3P15374 230 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 APBA1Q02410 837 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 TCP10Q12799 353 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX2-213ENST00000514949 SLC15A2Q16348 729 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 NFIL3Q16649 462 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
SNX2-213ENST00000514949 C8orf74Q6P047 294 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 SND1Q7KZF4 910 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX2-213ENST00000514949 FAM133AQ8N9E0 248 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 GDAP1L1Q96MZ0 367 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 NENFQ9UMX5 172 aa19.22■□□□□ 0.67
SNX2-213ENST00000514949 FAM196BA6NMK8 535 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 EYA4O95677 639 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 RPL13P26373 211 aaKnown RBP19.21■□□□□ 0.67
SNX2-213ENST00000514949 PON1P27169 355 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 PSMB7Q99436 277 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 KCNQ5Q9NR82 932 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 XRCC5P13010 732 aaKnown RBP19.21■□□□□ 0.67
SNX2-213ENST00000514949 CACNB3P54284 484 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 NAP1L1P55209 391 aaKnown RBP19.21■□□□□ 0.67
SNX2-213ENST00000514949 PTK2Q05397 1052 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 EPHA7Q15375 998 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 EXOC3L4Q17RC7 722 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 LRRC31Q6UY01 552 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms