RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DYNC1LI2O43237 492 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 SLITRK3O94933 977 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 MMP3P08254 477 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 CCL5P13501 91 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 CNGA1P29973 690 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 TXLNAP40222 546 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 UBA7P41226 1012 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 DGKDQ16760 1214 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 CCSAPQ6IQ19 270 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 UIMC1Q96RL1 719 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 LMBRD1Q9NUN5 540 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
PDLIM5-220ENST00000514830 CHMP2AO43633 222 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 PTMSP20962 102 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 MCM4P33991 863 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 PSMC5P62195 406 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 FSCN1Q16658 493 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 TMEM119Q4V9L6 283 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 CABP7Q86V35 215 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 C4orf19Q8IY42 314 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 SNX29Q8TEQ0 813 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 MRPS27Q92552 414 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 KAT6AQ92794 2004 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 ATP6V0A1Q93050 837 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 LENG1Q96BZ8 264 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 PCYT2Q99447 389 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 TSEN34Q9BSV6 310 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 SMARCAD1Q9H4L7 1026 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 ZSWIM4Q9H7M6 989 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 CENPFP49454 3210 aa13.43□□□□□ -0.26
PDLIM5-220ENST00000514830 GOLGA6L4A6NEF3 574 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 ZEB2O60315 1214 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 MED24O75448 989 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 F2P00734 622 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 LGALS2P05162 132 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 GJB1P08034 283 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 GRB10Q13322 594 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 MTFR1Q15390 333 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 USP49Q70CQ1 688 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 RNF180Q86T96 592 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 PCSK9Q8NBP7 692 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 ARRDC4Q8NCT1 418 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 CALML4Q96GE6 196 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 C16orf70Q9BSU1 422 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 CUEDC2Q9H467 287 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 STK17AQ9UEE5 414 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 OGDHLQ9ULD0 1010 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 TELO2Q9Y4R8 837 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 PPME1Q9Y570 386 aa13.42□□□□□ -0.26
PDLIM5-220ENST00000514830 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 CABYRO75952 493 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 STBD1O95210 358 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 C6orf222P0C671 652 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 PFKFB1P16118 471 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 PTGS1P23219 599 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 CDC25AP30304 524 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 CCT6AP40227 531 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 STAT5BP51692 787 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 PURAQ00577 322 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 E2F4Q16254 413 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 DYDC2Q96IM9 177 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 PNMA5Q96PV4 448 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 LXNQ9BS40 222 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 RNF208Q9H0X6 261 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 RGL1Q9NZL6 768 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 DBR1Q9UK59 544 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 KCNH3Q9ULD8 1083 aa13.41□□□□□ -0.26
PDLIM5-220ENST00000514830 HAS3O00219 553 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 BACH1O14867 736 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms