RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 HOMER1Q86YM7 354 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 NPAS4Q8IUM7 802 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 BCAS3Q9H6U6 928 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 TUBE1Q9UJT0 475 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.53
DDR1-276ENST00000514534 SQORQ9Y6N5 450 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 FRMPD4Q14CM0 1322 aa11.77□□□□□ -0.53
DDR1-276ENST00000514534 M0QZ92 97 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 SRGAP2BP0DMP2 458 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 VCPP55072 806 aaKnown RBP11.76□□□□□ -0.53
DDR1-276ENST00000514534 UBE3AQ05086 875 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 PPFIA1Q13136 1202 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 NLRX1Q86UT6 975 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 RILPL2Q969X0 211 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
DDR1-276ENST00000514534 TLE6Q9H808 572 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 RTEL1Q9NZ71 1219 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 BARX2Q9UMQ3 279 aaPredicted RBP11.76□□□□□ -0.53
DDR1-276ENST00000514534 CDY2AQ9Y6F7 541 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 C5orf42Q9H799 3197 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 PLXNA3P51805 1871 aa11.76□□□□□ -0.53
DDR1-276ENST00000514534 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
DDR1-276ENST00000514534 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 GLP2RO95838 553 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 SDSP20132 328 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 DNAJB1P25685 340 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 TCF7P36402 384 aaPredicted RBP11.75□□□□□ -0.53
DDR1-276ENST00000514534 MRPS6P82932 125 aaKnown RBP11.75□□□□□ -0.53
DDR1-276ENST00000514534 SP4Q02446 784 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 SEMA3FQ13275 785 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 GRIK4Q16099 956 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 PTPN21Q16825 1174 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 IER5Q5VY09 327 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 XRRA1Q6P2D8 792 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
DDR1-276ENST00000514534 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 RBM23Q86U06 439 aaKnown RBP11.75□□□□□ -0.53
DDR1-276ENST00000514534 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 SUSD6Q92537 303 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 ASIC4Q96FT7 647 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 PIGSQ96S52 555 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 ERAP1Q9NZ08 941 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 LRFN2Q9ULH4 789 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 CACNA1HO95180 2353 aa11.75□□□□□ -0.53
DDR1-276ENST00000514534 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 MBLAC1A4D2B0 266 aaPredicted RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 SCG2P13521 617 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 CD52P31358 61 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 PAN2Q504Q3 1202 aaKnown RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 TNPO1Q92973 898 aaKnown RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 CUL5Q93034 780 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 CDHR1Q96JP9 859 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 AGO3Q9H9G7 860 aaKnown RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 TLR9Q9NR96 1032 aa11.74□□□□□ -0.53
DDR1-276ENST00000514534 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
DDR1-276ENST00000514534 RRN3P2A6NIE6 340 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 H0Y858 1186 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 HIP1O00291 1037 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
DDR1-276ENST00000514534 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 TRIOO75962 3097 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 PAK2Q13177 524 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 GRM4Q14833 912 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 SEC23AQ15436 765 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 DUSP6Q16828 381 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 SPOUT1Q5T280 376 aaKnown RBP11.73□□□□□ -0.53
DDR1-276ENST00000514534 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
DDR1-276ENST00000514534 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 GLG1Q92896 1179 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 RIPOR3Q96MK2 946 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 DIAPH3Q9NSV4 1193 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 TRPV2Q9Y5S1 764 aa11.73□□□□□ -0.53
DDR1-276ENST00000514534 PTPRZ1P23471 2315 aaPredicted RBP11.72□□□□□ -0.53
DDR1-276ENST00000514534 MARK3P27448 753 aa11.72□□□□□ -0.53
DDR1-276ENST00000514534 IGBP1P78318 339 aa11.72□□□□□ -0.53
DDR1-276ENST00000514534 TRDNQ13061 729 aa11.72□□□□□ -0.53
DDR1-276ENST00000514534 TMEM184AQ6ZMB5 413 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms