RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TM4SF5O14894 197 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 FSCN2O14926 492 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 IDH1O75874 414 aaKnown RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 CYP2D6P10635 497 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 HOXD8P13378 290 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 LIMK1P53667 647 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 PDE4DQ08499 809 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 DGKDQ16760 1214 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 AASDHQ4L235 1098 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 MUM1L1Q5H9M0 696 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 TTC39AQ5SRH9 613 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 ZNF454Q8N9F8 522 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 PIK3R5Q8WYR1 880 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 KCNK17Q96T54 332 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 GPR20Q99678 358 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 FOXQ1Q9C009 403 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 PIH1D3Q9NQM4 214 aaKnown RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 ARHGEF3Q9NR81 526 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 RXFP3Q9NSD7 469 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 TTC3P53804 2025 aa9.1□□□□□ -0.95
CLDND1-229ENST00000513988 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
CLDND1-229ENST00000513988 MIA3Q5JRA6 1907 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 LRRN2O75325 713 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 FGF18O76093 207 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
CLDND1-229ENST00000513988 RALBP1Q15311 655 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 CCDC6Q16204 474 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 SPOUT1Q5T280 376 aaKnown RBP9.09□□□□□ -0.95
CLDND1-229ENST00000513988 PSAPL1Q6NUJ1 521 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 CHST3Q7LGC8 479 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 NELL1Q92832 810 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 CRNKL1Q9BZJ0 848 aaKnown RBP9.09□□□□□ -0.95
CLDND1-229ENST00000513988 ENTPD7Q9NQZ7 604 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 TMEM260Q9NX78 707 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 HCFC2Q9Y5Z7 792 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 LAMA5O15230 3695 aa9.09□□□□□ -0.95
CLDND1-229ENST00000513988 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ENPP3O14638 875 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 CAND2O75155 1236 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ARIH2O95376 493 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 F2P00734 622 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 GH1P01241 217 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ZNF286BP0CG31 522 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 SRFP11831 508 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ZAP70P43403 619 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 CDK8P49336 464 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 APOBRQ0VD83 1088 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 HIC1Q14526 733 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 COL28A1Q2UY09 1125 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 DCLRE1AQ6PJP8 1040 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 CCDC149Q6ZUS6 474 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 THNSL1Q8IYQ7 743 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 CELF5Q8N6W0 485 aaKnown RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 C12orf76Q8N812 135 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ATP6V0A1Q93050 837 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 MPHOSPH6Q99547 160 aaKnown RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 TCF25Q9BQ70 676 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 MYL10Q9BUA6 226 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 WASF3Q9UPY6 502 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-229ENST00000513988 FREM2Q5SZK8 3169 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
CLDND1-229ENST00000513988 DENND4AQ7Z401 1863 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 HIDE1A8MVS5 230 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 HAS3O00219 553 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 UBTFL1P0CB47 393 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-229ENST00000513988 PLA2G2AP14555 144 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 ARHGAP1Q07960 439 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 ZNF252P-AS1Q0IIN9 211 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 BAATQ14032 418 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-229ENST00000513988 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 TSSK4Q6SA08 328 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 RSAD2Q8WXG1 361 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 SHDQ96IW2 340 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
CLDND1-229ENST00000513988 SCNM1Q9BWG6 230 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 FAM126AQ9BYI3 521 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-229ENST00000513988 NGRNQ9NPE2 291 aaKnown RBP9.07□□□□□ -0.96
CLDND1-229ENST00000513988 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
CLDND1-229ENST00000513988 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 C17orf102A2RUQ5 167 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 GHRP10912 638 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 NOVA1P51513 510 aaKnown RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 LSM14BQ9BX40 385 aaKnown RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-229ENST00000513988 DZANK1Q9NVP4 752 aa9.06□□□□□ -0.96
CLDND1-229ENST00000513988 PUF60Q9UHX1 559 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms