RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
SSBP2-217ENST00000513785 NCAPD3P42695 1498 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
SSBP2-217ENST00000513785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
SSBP2-217ENST00000513785 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 ADCY3O60266 1144 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 ALG1Q9BT22 464 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 IGSF5Q9NSI5 407 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 SLC4A7Q9Y6M7 1214 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 TOP2AP11388 1531 aaKnown RBP6.99□□□□□ -1.29
SSBP2-217ENST00000513785 HMGXB3Q12766 1538 aa6.99□□□□□ -1.29
SSBP2-217ENST00000513785 H0Y858 1186 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 FOXS1O43638 330 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 AMHP03971 560 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 ZNF888P0CJ79 500 aaPredicted RBP6.98□□□□□ -1.29
SSBP2-217ENST00000513785 TACR2P21452 398 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 ZC3H6P61129 1189 aaKnown RBP6.98□□□□□ -1.29
SSBP2-217ENST00000513785 DBPQ10586 325 aaPredicted RBP6.98□□□□□ -1.29
SSBP2-217ENST00000513785 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 TCTN3Q6NUS6 607 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 LRRC37BQ96QE4 947 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 CDK5RAP1Q96SZ6 601 aaKnown RBP6.98□□□□□ -1.29
SSBP2-217ENST00000513785 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 TRIM55Q9BYV6 548 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
SSBP2-217ENST00000513785 SELENOPP49908 381 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 PAK1Q13153 545 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 FAM209AQ5JX71 171 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 SPDYAQ5MJ70 313 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 BTBD8Q5XKL5 378 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 ARHGAP36Q6ZRI8 547 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 OSTM1Q86WC4 334 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 LMF1Q96S06 567 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 SEC61A2Q9H9S3 476 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 PFDN2Q9UHV9 154 aa6.97□□□□□ -1.29
SSBP2-217ENST00000513785 AMY2AP04746 511 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 PTPN1P18031 435 aaKnown RBP6.96□□□□□ -1.3
SSBP2-217ENST00000513785 AMY2BP19961 511 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 SCUBE1Q8IWY4 988 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 PCDH19Q8TAB3 1148 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 ZNF669Q96BR6 464 aaPredicted RBP6.96□□□□□ -1.3
SSBP2-217ENST00000513785 SORCS2Q96PQ0 1159 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.3
SSBP2-217ENST00000513785 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 TCAF1Q9Y4C2 921 aa6.96□□□□□ -1.3
SSBP2-217ENST00000513785 ESYT3A0FGR9 886 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 CCDC85CA6NKD9 419 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 MAN2B1O00754 1011 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 WNT9AO14904 365 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 PDPK1O15530 556 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 SLPIP03973 132 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 C6orf222P0C671 652 aaPredicted RBP6.95□□□□□ -1.3
SSBP2-217ENST00000513785 PDE6AP16499 860 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 USP10Q14694 798 aaKnown RBP6.95□□□□□ -1.3
SSBP2-217ENST00000513785 NOLC1Q14978 699 aaKnown RBP eCLIP6.95□□□□□ -1.3
SSBP2-217ENST00000513785 DPH6Q7L8W6 267 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 TAX1BP1Q86VP1 789 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 PTRH1Q86Y79 214 aaKnown RBP6.95□□□□□ -1.3
SSBP2-217ENST00000513785 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 ZFPM1Q8IX07 1006 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 PTPRN2Q92932 1015 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 CDC6Q99741 560 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 VPS11Q9H270 941 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 CATSPERZQ9NTU4 200 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 RIC8BQ9NVN3 520 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 SRRDQ9UH36 339 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 CBLCQ9ULV8 474 aa6.95□□□□□ -1.3
SSBP2-217ENST00000513785 TRBV23-1A0A0A0MS06 115 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
SSBP2-217ENST00000513785 MUSKO15146 869 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 DIAPH1O60610 1272 aaKnown RBP6.94□□□□□ -1.3
SSBP2-217ENST00000513785 STK10O94804 968 aaKnown RBP6.94□□□□□ -1.3
SSBP2-217ENST00000513785 PYGMP11217 842 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 POLD1P28340 1107 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 ACVRL1P37023 503 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 GPR19Q15760 415 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 MTDHQ86UE4 582 aaKnown RBP6.94□□□□□ -1.3
SSBP2-217ENST00000513785 NEIL1Q96FI4 390 aaPredicted RBP6.94□□□□□ -1.3
SSBP2-217ENST00000513785 CARD11Q9BXL7 1154 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 TESMINQ9Y4I5 508 aa6.94□□□□□ -1.3
SSBP2-217ENST00000513785 AQP7O14520 342 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 KCNK3O14649 394 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 FAM153BP0C7A2 387 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 KRT15P19012 456 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 JAM2P57087 298 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 GUCY1A3Q02108 690 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 SSRP1Q08945 709 aaKnown RBP6.93□□□□□ -1.3
SSBP2-217ENST00000513785 TOP3AQ13472 1001 aaPredicted RBP6.93□□□□□ -1.3
SSBP2-217ENST00000513785 RNF151Q2KHN1 245 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 MTERF2Q49AM1 385 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 MAMDC2Q7Z304 686 aaPredicted RBP6.93□□□□□ -1.3
SSBP2-217ENST00000513785 CKAP2LQ8IYA6 745 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 IFNL2Q8IZJ0 200 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 NLGN4XQ8N0W4 816 aa6.93□□□□□ -1.3
SSBP2-217ENST00000513785 ZBTB38Q8NAP3 1195 aaPredicted RBP6.93□□□□□ -1.3
SSBP2-217ENST00000513785 GIMAP8Q8ND71 665 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms