RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 PCYT2Q99447 389 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 SPZ1Q9BXG8 430 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 LMAN2LQ9H0V9 348 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
TCOF1-212ENST00000513538 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 MUTYHQ9UIF7 546 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 CDY2AQ9Y6F7 541 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 MRPL42Q9Y6G3 142 aaKnown RBP11.11□□□□□ -0.63
TCOF1-212ENST00000513538 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-212ENST00000513538 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 MMP1P03956 469 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 CHMLP26374 656 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 MRE11P49959 708 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 GATMP50440 423 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
TCOF1-212ENST00000513538 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
TCOF1-212ENST00000513538 AAMPQ13685 434 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 BTG3Q14201 252 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-212ENST00000513538 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 TSHZ1Q6ZSZ6 1077 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 ZNF654Q8IZM8 581 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 CMTR1Q8N1G2 835 aaKnown RBP11.1□□□□□ -0.63
TCOF1-212ENST00000513538 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 GPRASP2Q96D09 838 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 IGFLR1Q9H665 355 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 PCDHGC5Q9Y5F6 944 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
TCOF1-212ENST00000513538 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 ERICH2A1L162 156 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 ITGB1P05556 798 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 CD52P31358 61 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 IGBP1P78318 339 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 MRPS6P82932 125 aaKnown RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 UBE2SQ16763 222 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 XRRA1Q6P2D8 792 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 SRBD1Q8N5C6 995 aaKnown RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 TRAPPC12Q8WVT3 735 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 FAM49AQ9H0Q0 323 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-212ENST00000513538 ERAP1Q9NZ08 941 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 CLEC1BQ9P126 229 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 FAM50BQ9Y247 325 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
TCOF1-212ENST00000513538 EVPLQ92817 2033 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 SGSM2O43147 1006 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 NCK2O43639 380 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 DDAH1O94760 285 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 GLP2RO95838 553 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 INSRRP14616 1297 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 RXRAP19793 462 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 TMEM62Q0P6H9 643 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 ADAM15Q13444 863 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
TCOF1-212ENST00000513538 HERC4Q5GLZ8 1057 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-212ENST00000513538 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-212ENST00000513538 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 SEPT1Q8WYJ6 367 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 CUL5Q93034 780 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 TMX1Q9H3N1 280 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
TCOF1-212ENST00000513538 STXBP3O00186 592 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 SH2B2O14492 632 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 MTMR1Q13613 665 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 RSPH3Q86UC2 560 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 CMTR2Q8IYT2 770 aaKnown RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 KLHL23Q8NBE8 558 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 CYP2W1Q8TAV3 490 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 GLG1Q92896 1179 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 P2RX5Q93086 422 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 SMARCAD1Q9H4L7 1026 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 PSTPIP2Q9H939 334 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
TCOF1-212ENST00000513538 TRIOO75962 3097 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 IGSF9BQ9UPX0 1349 aa11.07□□□□□ -0.64
TCOF1-212ENST00000513538 WDR81Q562E7 1941 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 EYA4O95677 639 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 NDUFV1P49821 464 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PLCB4Q15147 1175 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms