RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 RTP1P59025 263 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 PSMC6P62333 389 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 SP4Q02446 784 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 SWSAP1Q6NVH7 229 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 MIER3Q7Z3K6 550 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
POLR2J3-218ENST00000513506 NRCAMQ92823 1304 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 DDX39AO00148 427 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 ZNF862O60290 1169 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 MUTP22033 750 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 TLE2Q04725 743 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 PLCB4Q15147 1175 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 IL17AQ16552 155 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 GLG1Q92896 1179 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 UIMC1Q96RL1 719 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 STK24Q9Y6E0 443 aa17.47■□□□□ 0.39
POLR2J3-218ENST00000513506 MARCH6O60337 910 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 SLITRK3O94933 977 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 ATN1P54259 1190 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 PSMC5P62195 406 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 NUCB2P80303 420 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 RBL2Q08999 1139 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 SLC39A14Q15043 492 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 SF3A1Q15459 793 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 TRIM60Q495X7 471 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 UTP14CQ5TAP6 766 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 PDXDC2PQ6P474 469 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 C4orf19Q8IY42 314 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 KCTD17Q8N5Z5 321 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 VTI1AQ96AJ9 217 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 POLR3CQ9BUI4 534 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 NIFKQ9BYG3 293 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 HDAC6Q9UBN7 1215 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 TBX21Q9UL17 535 aa17.46■□□□□ 0.39
POLR2J3-218ENST00000513506 COL1A2P08123 1366 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 RRN3P2A6NIE6 340 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 DCDC2CA8MYV0 355 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 ZBTB42B2RXF5 422 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 BACH1O14867 736 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 SLC26A4O43511 780 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 HBP1O60381 514 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 SMIM10L2AP0DMW4 78 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 SMIM10L2BP0DMW5 78 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 HIC1Q14526 733 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 AK8Q96MA6 479 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 ZNF396Q96N95 335 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 GABBR1Q9UBS5 961 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 PPME1Q9Y570 386 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 CLIC4Q9Y696 253 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 DOCK5Q9H7D0 1870 aa17.45■□□□□ 0.38
POLR2J3-218ENST00000513506 POTEB3A0JP26 581 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 CHMP2AO43633 222 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 B4GALT4O60513 344 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 YEATS4O95619 227 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 SPATA31C1P0DKV0 1188 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 GNAT1P11488 350 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 RPA1P27694 616 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 TECP42680 631 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 TARBP2Q15633 366 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 UGCGQ16739 394 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 ZNF484Q5JVG2 852 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 MARCH8Q5T0T0 291 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 POTEBQ6S5H4 581 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 SERINC5Q86VE9 423 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 LINC00301Q8NCQ3 95 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 CEP89Q96ST8 783 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 ZSWIM4Q9H7M6 989 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 TUFT1Q9NNX1 390 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 SAMM50Q9Y512 469 aa17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 SRPRBQ9Y5M8 271 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-218ENST00000513506 TLR3O15455 904 aaKnown RBP17.43■□□□□ 0.38
POLR2J3-218ENST00000513506 OATP04181 439 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms