RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RAG1P15918 1043 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 PRR5P85299 388 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 PURAQ00577 322 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 CDSNQ15517 529 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 REC114Q7Z4M0 266 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 IFNL2Q8IZJ0 200 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 SH3RF3Q8TEJ3 882 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 RHOVQ96L33 236 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 RAB3GAP2Q9H2M9 1393 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 SLC12A5Q9H2X9 1139 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 AP5S1Q9NUS5 200 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 SPATA6Q9NWH7 488 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 ASAP1Q9ULH1 1129 aa5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 DICER1Q9UPY3 1922 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-218ENST00000513341 SCN4AP35499 1836 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 INSRP06213 1382 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 WDR33Q9C0J8 1336 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 A0A1W2PQ27 194 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 A0A1W2PQ64 194 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 A0A1W2PQC6 194 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 A0A1W2PQD8 194 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ERVV-2B6SEH9 535 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 CA12O43570 354 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ATE1O95260 518 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 CHRNA5P30532 468 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 MAP2K2P36507 400 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ECE1P42892 770 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 KIAA2012Q0VF49 1180 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 TAF1CQ15572 869 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 RTP2Q5QGT7 225 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 MEI1Q5TIA1 1274 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 CYP2R1Q6VVX0 501 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 TTLL7Q6ZT98 887 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 SPRED1Q7Z699 444 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 PNMA8AQ86V59 439 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ZFPM1Q8IX07 1006 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 LGI4Q8N135 537 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ADAMTS17Q8TE56 1095 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 KISS1RQ969F8 398 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 TSPAN17Q96FV3 270 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 CDK5RAP1Q96SZ6 601 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ZNF747Q9BV97 191 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 ANTXR1Q9H6X2 564 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 GMIPQ9P107 970 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 HCFC2Q9Y5Z7 792 aa5.09□□□□□ -1.59
PDLIM5-218ENST00000513341 LTBP3Q9NS15 1303 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 H0YIN7 160 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 POLRMTO00411 1230 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 PF4P02776 101 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 GSNP06396 782 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 ARSHQ5FYA8 562 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 CNNM2Q9H8M5 875 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 MINPP1Q9UNW1 487 aa5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 TNRC18O15417 2968 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-218ENST00000513341 TONSLQ96HA7 1378 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 USP42Q9H9J4 1324 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 F8W031 263 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 CLEC3AO75596 197 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 HSP90AB1P08238 724 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 PHKG2P15735 406 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 DDR1Q08345 913 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 HSP90AB2PQ58FF8 381 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 FAM26FQ5R3K3 315 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 GCC1Q96CN9 775 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 GPR101Q96P66 508 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 RSRP1Q9BUV0 290 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 TAF1DQ9H5J8 278 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 PCDHB12Q9Y5F1 795 aa5.07□□□□□ -1.6
PDLIM5-218ENST00000513341 A0A1W2PP64 1363 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 KDRP35968 1356 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 MYH14Q7Z406 1995 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 FYB1O15117 783 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 DDNO94850 711 aaPredicted RBP5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 MC3RP41968 323 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 TRIM26Q12899 539 aaPredicted RBP5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 SLC9A5Q14940 896 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 BICRALQ6AI39 1079 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 GLB1LQ6UWU2 654 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 JAMLQ86YT9 394 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 CNTROBQ8N137 903 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 ALG3Q92685 438 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 TMEM74Q96NL1 305 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 LRRC3Q9BY71 257 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 VPS11Q9H270 941 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 PCDH18Q9HCL0 1135 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 GFOD1Q9NXC2 390 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 COL5A3P25940 1745 aaPredicted RBP5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 TIAM2Q8IVF5 1701 aa5.06□□□□□ -1.6
PDLIM5-218ENST00000513341 FLT4P35916 1363 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 FER1L6Q2WGJ9 1857 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 SERPINB2P05120 415 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 GLI4P10075 376 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 CACNB2Q08289 660 aaPredicted RBP5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 PWP1Q13610 501 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 RRS1Q15050 365 aaKnown RBP5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 SURF1Q15526 300 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms