RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FMR1NBQ8N0W7 255 aaPredicted RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 ENGASEQ8NFI3 743 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 CALML4Q96GE6 196 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 DYDC2Q96IM9 177 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 PNMA5Q96PV4 448 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 RGL1Q9NZL6 768 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 CCDC39Q9UFE4 941 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 A0A087X0B3 334 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 RARBP10826 455 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 SYKP43405 635 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 QARSP47897 775 aaKnown RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 NKX3-2P78367 333 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 GRB10Q13322 594 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 ECM1Q16610 540 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 SLC9C1Q4G0N8 1177 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 TMEM119Q4V9L6 283 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 GPT2Q8TD30 523 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 LENG1Q96BZ8 264 aaPredicted RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 NT5C3AQ9H0P0 336 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 AP5M1Q9H0R1 490 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 HMX1Q9NP08 348 aaPredicted RBP14.05□□□□□ -0.16
PDPN-210ENST00000513143 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 LOXHD1Q8IVV2 1947 aa14.05□□□□□ -0.16
PDPN-210ENST00000513143 FRMPD3Q5JV73 1810 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 A6NJR5 290 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 POLR2DO15514 142 aaKnown RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 MSCO60682 206 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 LGR5O75473 907 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 MBD3O95983 291 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 MMP3P08254 477 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 TCF7P36402 384 aaPredicted RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 GJA9P57773 515 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 PSMC5P62195 406 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 CYP4A11Q02928 519 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 CTTNQ14247 550 aaKnown RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 CCDC60Q8IWA6 550 aaPredicted RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 KCTD17Q8N5Z5 321 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 PDILTQ8N807 584 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 BANK1Q8NDB2 785 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 AFAP1L1Q8TED9 768 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 CDK5RAP3Q96JB5 506 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 PCYT2Q99447 389 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 LXNQ9BS40 222 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 ZSWIM4Q9H7M6 989 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 WRAP73Q9P2S5 460 aaPredicted RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
PDPN-210ENST00000513143 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 MAFBQ9Y5Q3 323 aaPredicted RBP14.04□□□□□ -0.16
PDPN-210ENST00000513143 CTAGE5O15320 804 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDPN-210ENST00000513143 NR1I2O75469 434 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 ZNF202O95125 648 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 LYPLA2O95372 231 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 PLCG1P19174 1290 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 CPT1AP50416 773 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 ZRSR1Q15695 479 aaKnown RBP14.03□□□□□ -0.16
PDPN-210ENST00000513143 E2F4Q16254 413 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 UGCGQ16739 394 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 RRAGBQ5VZM2 374 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 C4orf19Q8IY42 314 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 RASSF8Q8NHQ8 419 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 PLIN2Q99541 437 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 ZNF302Q9NR11 478 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 DDX19AQ9NUU7 478 aaKnown RBP14.03□□□□□ -0.16
PDPN-210ENST00000513143 USP25Q9UHP3 1055 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
PDPN-210ENST00000513143 BACH1O14867 736 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 ZNF862O60290 1169 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 STAT6P42226 847 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 STAT5BP51692 787 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
PDPN-210ENST00000513143 DGKDQ16760 1214 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 LONRF3Q496Y0 759 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 NAALADL2Q58DX5 795 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.17
PDPN-210ENST00000513143 LHX8Q68G74 356 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms