RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 SFNP31947 248 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 TIE1P35590 1138 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 VEGFBP49765 207 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 JAK3P52333 1124 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 NUBP1P53384 320 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 SLC12A3P55017 1021 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 MAP2K5Q13163 448 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 UGCGQ16739 394 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 ANO6Q4KMQ2 910 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 TAPT1Q6NXT6 567 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 ABHD15Q6UXT9 468 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 SV2BQ7L1I2 683 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 EEPD1Q7L9B9 569 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 FBXO16Q8IX29 292 aaPredicted RBP10.46□□□□□ -0.73
DHFR-206ENST00000513048 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 GSDMAQ96QA5 445 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 MPHOSPH6Q99547 160 aaKnown RBP10.46□□□□□ -0.73
DHFR-206ENST00000513048 DNAJC25Q9H1X3 360 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 JPH1Q9HDC5 661 aaPredicted RBP10.46□□□□□ -0.73
DHFR-206ENST00000513048 ANO10Q9NW15 660 aa10.46□□□□□ -0.73
DHFR-206ENST00000513048 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.73
DHFR-206ENST00000513048 LOXHD1Q8IVV2 1947 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 IGKV6D-21A0A0A0MT36 114 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 GOLGA6L3A6NEY3 463 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 WDR64B1ANS9 1081 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 FARP2O94887 1054 aaPredicted RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 EYA4O95677 639 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 RPN1P04843 607 aaKnown RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 P4HBP07237 508 aaKnown RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 CYP11B2P19099 503 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 MAP2K2P36507 400 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 ACTR2P61160 394 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 HTRA3P83110 453 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 CAP1Q01518 475 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 EHHADHQ08426 723 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 KCNB1Q14721 858 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 IQCB1Q15051 598 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 TMEM63BQ5T3F8 832 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 ISM2Q6H9L7 571 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 KCNV1Q6PIU1 500 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 DPP9Q86TI2 863 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 TPH2Q8IWU9 490 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 MSL3Q8N5Y2 521 aaKnown RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 SYT2Q8N9I0 419 aaPredicted RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 LXNQ9BS40 222 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 VTA1Q9NP79 307 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 PDGFCQ9NRA1 345 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
DHFR-206ENST00000513048 FLRT1Q9NZU1 646 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 SLC9A2Q9UBY0 812 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
DHFR-206ENST00000513048 GSTTP1A0A1W2PQM5 241 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 ZBTB39O15060 712 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 RHOBTB3O94955 611 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 CAVIN2O95810 425 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 QARSP47897 775 aaKnown RBP10.44□□□□□ -0.74
DHFR-206ENST00000513048 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
DHFR-206ENST00000513048 AMPD3Q01432 767 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 NEDD9Q14511 834 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 DHX8Q14562 1220 aaKnown RBP10.44□□□□□ -0.74
DHFR-206ENST00000513048 LY6KQ17RY6 165 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 METTL7BQ6UX53 244 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 CYFIP1Q7L576 1253 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 C4orf19Q8IY42 314 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 GIMAP8Q8ND71 665 aaPredicted RBP10.44□□□□□ -0.74
DHFR-206ENST00000513048 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 NACC1Q96RE7 527 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 MED15Q96RN5 788 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 PCYT2Q99447 389 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 BPIFA3Q9BQP9 254 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 ARHGAP39Q9C0H5 1083 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 ZSWIM4Q9H7M6 989 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 GRPEL1Q9HAV7 217 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 CBX8Q9HC52 389 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 RNF186Q9NXI6 227 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 PCDHB13Q9Y5F0 798 aa10.44□□□□□ -0.74
DHFR-206ENST00000513048 IGSF9BQ9UPX0 1349 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 NPHP3-ACAD11A0A0J9YXS1 232 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 PVALEFA0A1B0GWK0 134 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 FRMD3A2A2Y4 597 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 TNPO2O14787 897 aaKnown RBP10.43□□□□□ -0.74
DHFR-206ENST00000513048 ZNF862O60290 1169 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 SORBS3O60504 671 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 GGPS1O95749 300 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 TBC1D8O95759 1140 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 XRCC6P12956 609 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■□□ 16.3
DHFR-206ENST00000513048 ZNF165P49910 485 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 PSMC5P62195 406 aa10.43□□□□□ -0.74
DHFR-206ENST00000513048 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms