RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 ZNF746Q6NUN9 644 aaPredicted RBP11.32□□□□□ -0.6
SSBP2-216ENST00000512923 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 CYFIP1Q7L576 1253 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 CTU1Q7Z7A3 348 aaKnown RBP11.32□□□□□ -0.6
SSBP2-216ENST00000512923 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
SSBP2-216ENST00000512923 SMAP1Q8IYB5 467 aaPredicted RBP11.32□□□□□ -0.6
SSBP2-216ENST00000512923 RDM1Q8NG50 284 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 ERMNQ8TAM6 284 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 UNC45AQ9H3U1 944 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 MLXIPQ9HAP2 919 aa11.32□□□□□ -0.6
SSBP2-216ENST00000512923 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 WDR64B1ANS9 1081 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 SEPT4O43236 478 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 INHAP05111 366 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 CMA1P23946 247 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 UBA7P41226 1012 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 JAK3P52333 1124 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 KRT79Q5XKE5 535 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 SHC4Q6S5L8 630 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 B3GNT9Q6UX72 402 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 NEK9Q8TD19 979 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 MRPS27Q92552 414 aaKnown RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
SSBP2-216ENST00000512923 FAM13BQ9NYF5 915 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 SAMM50Q9Y512 469 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 KDM3AQ9Y4C1 1321 aa11.31□□□□□ -0.6
SSBP2-216ENST00000512923 HTTP42858 3142 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SLC26A4O43511 780 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 CCNE2O96020 404 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SMPD1P17405 629 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 CNGA1P29973 690 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 ACTR2P61160 394 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SP4Q02446 784 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 TRIM32Q13049 653 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 EPHA7Q15375 998 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 RESP18Q5W5W9 173 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 CCDC73Q6ZRK6 1079 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 CABP7Q86V35 215 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
SSBP2-216ENST00000512923 COPS5Q92905 334 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
SSBP2-216ENST00000512923 Q9Y3F1 56 aa11.3□□□□□ -0.6
SSBP2-216ENST00000512923 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 LOXHD1Q8IVV2 1947 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 EML1O00423 815 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 DPYSL4O14531 572 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 ADCY6O43306 1168 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 SORBS3O60504 671 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 MSCO60682 206 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 GADD45BO75293 160 aaPredicted RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PSAPP07602 524 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 RARBP10826 455 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PFKFB1P16118 471 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 SEPT1Q8WYJ6 367 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 AP5M1Q9H0R1 490 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 TUFT1Q9NNX1 390 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
SSBP2-216ENST00000512923 CCDC39Q9UFE4 941 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 PCDHA10Q9Y5I2 948 aa11.29□□□□□ -0.6
SSBP2-216ENST00000512923 FAM237AA0A1B0GTK4 181 aa11.28□□□□□ -0.6
SSBP2-216ENST00000512923 A0A1B0GVL5 298 aa11.28□□□□□ -0.6
SSBP2-216ENST00000512923 DKC1O60832 514 aaKnown RBP eCLIP11.28□□□□□ -0.6
SSBP2-216ENST00000512923 ATG7O95352 703 aa11.28□□□□□ -0.6
SSBP2-216ENST00000512923 MBD3O95983 291 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms