RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 AJUBAQ96IF1 538 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 CDC6Q99741 560 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ALG1Q9BT22 464 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 TANGO6Q9C0B7 1094 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 MEGF9Q9H1U4 602 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 BARX1Q9HBU1 254 aaPredicted RBP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 JADE2Q9NQC1 790 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 CATSPERZQ9NTU4 200 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 KDM2BQ8NHM5 1336 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 ESYT3A0FGR9 886 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 C1QTNF3-AMACRE9PGA6 284 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 WNT9AO14904 365 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 U2SURPO15042 1029 aaKnown RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 SUV39H1O43463 412 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 FBXO21O94952 628 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 CRTAMO95727 393 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 PTPN1P18031 435 aaKnown RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 CSF2RBP32927 897 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 RBL2Q08999 1139 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 GPR19Q15760 415 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 TM4SF20Q53R12 229 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 FSTL4Q6MZW2 842 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 Q8TCH9 128 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 SH3RF3Q8TEJ3 882 aaPredicted RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 DVL3Q92997 716 aaPredicted RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 KISS1RQ969F8 398 aaPredicted RBP3.65□□□□□ -1.83
PDGFC-208ENST00000512711 FBXW5Q969U6 566 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 DHRS4Q9BTZ2 278 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 KATNBL1Q9H079 304 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 SMURF1Q9HCE7 757 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 RIC8BQ9NVN3 520 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 SRPK3Q9UPE1 567 aa3.65□□□□□ -1.83
PDGFC-208ENST00000512711 PATE3B3GLJ2 98 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 ARVCFO00192 962 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 PLSCR1O15162 318 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 FOXS1O43638 330 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 ZNF623O75123 536 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 DNM2P50570 870 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 ZXDAP98168 799 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SERINC3Q13530 473 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SURF1Q15526 300 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SLFN13Q68D06 897 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 TCTN3Q6NUS6 607 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 C16orf59Q7L2K0 433 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 MTDHQ86UE4 582 aaKnown RBP3.64□□□□□ -1.83
PDGFC-208ENST00000512711 CIR1Q86X95 450 aaPredicted RBP3.64□□□□□ -1.83
PDGFC-208ENST00000512711 PALM2Q8IXS6 379 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 Q8N1X5 172 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 TTC9BQ8N6N2 239 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SLC7A14Q8TBB6 771 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SCLYQ96I15 445 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 DNAJC7Q99615 494 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 KLC2Q9H0B6 622 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 PODXL2Q9NZ53 605 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 SIRPGQ9P1W8 387 aa3.64□□□□□ -1.83
PDGFC-208ENST00000512711 MRPS23Q9Y3D9 190 aaKnown RBP3.64□□□□□ -1.83
PDGFC-208ENST00000512711 CCDC66A2RUB6 948 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 H0Y858 1186 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 ZNF561-AS1K7EIQ3 104 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 AQP7O14520 342 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 RASGRP1O95267 797 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 FSHBP01225 129 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 AMHP03971 560 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 C4BPAP04003 597 aaKnown RBP3.63□□□□□ -1.83
PDGFC-208ENST00000512711 CHGBP05060 677 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 KCNA6P17658 529 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 MC4RP32245 332 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 SUMO1P63165 101 aaKnown RBP3.63□□□□□ -1.83
PDGFC-208ENST00000512711 RASA3Q14644 834 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 R3HDM1Q15032 1099 aaKnown RBP3.63□□□□□ -1.83
PDGFC-208ENST00000512711 TBR1Q16650 682 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 ABHD17CQ6PCB6 329 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 LRSAM1Q6UWE0 723 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 MAMDC2Q7Z304 686 aaPredicted RBP3.63□□□□□ -1.83
PDGFC-208ENST00000512711 PLEKHH3Q7Z736 793 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 LRRC37BQ96QE4 947 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 WRNIP1Q96S55 665 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 AMNQ9BXJ7 453 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 DEF6Q9H4E7 631 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 SLC52A2Q9HAB3 445 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 BTBD7Q9P203 1132 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 CDC42EP3Q9UKI2 254 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 COQ6Q9Y2Z9 468 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 TSC22D4Q9Y3Q8 395 aa3.63□□□□□ -1.83
PDGFC-208ENST00000512711 RASSF10A6NK89 507 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 MPIG6BO95866 241 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 ADCY8P40145 1251 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 GABREP78334 506 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 LACTBP83111 547 aaPredicted RBP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 KRTAP1-1Q07627 177 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 TOP3AQ13472 1001 aaPredicted RBP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 RNF151Q2KHN1 245 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 LARP4Q71RC2 724 aaKnown RBP eCLIP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 FGD2Q7Z6J4 655 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 RALYLQ86SE5 291 aaKnown RBP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 TAX1BP1Q86VP1 789 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 ZC3H7AQ8IWR0 971 aaKnown RBP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 NLGN4XQ8N0W4 816 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 LILRB2Q8N423 598 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms