RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RNF20Q5VTR2 975 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 TSHZ1Q6ZSZ6 1077 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-216ENST00000512683 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-216ENST00000512683 UPF3BQ9BZI7 483 aaKnown RBP14.39□□□□□ -0.11
VEGFA-216ENST00000512683 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
VEGFA-216ENST00000512683 COL4A6Q14031 1691 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 NFASCO94856 1347 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 TRIP12Q14669 1992 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-216ENST00000512683 GBF1Q92538 1859 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 DOCK5Q9H7D0 1870 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 GHRP10912 638 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 SP4Q02446 784 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 CTC1Q2NKJ3 1217 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 TCEAL5Q5H9L2 206 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 PPP1R18Q6NYC8 613 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 TMTC3Q6ZXV5 915 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 P2RX5Q93086 422 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 PPP2R3CQ969Q6 453 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 MXRA8Q9BRK3 442 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 MYL10Q9BUA6 226 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 JPH1Q9HDC5 661 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-216ENST00000512683 CD320Q9NPF0 282 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 PCDHA2Q9Y5H9 948 aa14.38□□□□□ -0.11
VEGFA-216ENST00000512683 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 M0QZ92 97 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 DGKIO75912 1065 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 ATG7O95352 703 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 INSRRP14616 1297 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-216ENST00000512683 MRPS6P82932 125 aaKnown RBP14.37□□□□□ -0.11
VEGFA-216ENST00000512683 ODR4Q5SWX8 454 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 MCTP2Q6DN12 878 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 RUFY4Q6ZNE9 571 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 NIPA1Q7RTP0 329 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 DNAJB3Q8WWF6 145 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 SDF4Q9BRK5 362 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 KCNH6Q9H252 994 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 RC3H2Q9HBD1 1191 aaKnown RBP14.37□□□□□ -0.11
VEGFA-216ENST00000512683 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 KCNH7Q9NS40 1196 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 SLC9A2Q9UBY0 812 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 CDY2AQ9Y6F7 541 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 KDM3AQ9Y4C1 1321 aa14.37□□□□□ -0.11
VEGFA-216ENST00000512683 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-216ENST00000512683 CTNNB1P35222 781 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 STAT5BP51692 787 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 RCAN1P53805 252 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 BTG3Q14201 252 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-216ENST00000512683 TSGA10IPQ3SY00 556 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 CMTR2Q8IYT2 770 aaKnown RBP14.36□□□□□ -0.11
VEGFA-216ENST00000512683 CRIPAKQ8N1N5 446 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 POP1Q99575 1024 aaKnown RBP14.36□□□□□ -0.11
VEGFA-216ENST00000512683 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 TELO2Q9Y4R8 837 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 ADGRA3Q8IWK6 1321 aa14.36□□□□□ -0.11
VEGFA-216ENST00000512683 MEIS1O00470 390 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 LINC00271P0C7V0 271 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 IL9P15248 144 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 AP3B2Q13367 1082 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 ADHFE1Q8IWW8 467 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 ZNF710Q8N1W2 664 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
VEGFA-216ENST00000512683 CELF4Q9BZC1 486 aaKnown RBP14.35□□□□□ -0.11
VEGFA-216ENST00000512683 C11orf16Q9NQ32 467 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 TRPV2Q9Y5S1 764 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 BRWD1Q9NSI6 2320 aa14.35□□□□□ -0.11
VEGFA-216ENST00000512683 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 DCXO43602 365 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 HBP1O60381 514 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 MMP1P03956 469 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 MARK3P27448 753 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 ACTR2P61160 394 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 SMAD2Q15796 467 aaKnown RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 UBE2SQ16763 222 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 DHX32Q7L7V1 743 aaKnown RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 CMTR1Q8N1G2 835 aaKnown RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 PCYT2Q99447 389 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
VEGFA-216ENST00000512683 CLDND1Q9NY35 253 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 IGSF9BQ9UPX0 1349 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 PIEZO1Q92508 2521 aa14.34□□□□□ -0.11
VEGFA-216ENST00000512683 CCDC196A0A1B0GTZ2 297 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 GRM6O15303 877 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms