RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TMEM87BQ96K49 555 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CCT7Q99832 543 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ABCG4Q9H172 646 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 THG1LQ9NWX6 298 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 UTP6Q9NYH9 597 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 XDHP47989 1333 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 H7C1W4 665 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 MCF2LO15068 1137 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CAVIN2O95810 425 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 INHBAP08476 426 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 HPGDP15428 266 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 SNX1Q13596 522 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 FAM182BQ5T319 152 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 SRLQ86TD4 932 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CAPSLQ8WWF8 208 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 NT5C1BQ96P26 610 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 LLPHQ9BRT6 129 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 LRRIQ3A6PVS8 624 aaPredicted RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 KRT14P02533 472 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 EHHADHQ08426 723 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 BRAPQ7Z569 592 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 KLHL7Q8IXQ5 586 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 FAM76AQ8TAV0 307 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 RSRC1Q96IZ7 334 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 CCDC3Q9BQI4 270 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 NLRC4Q9NPP4 1024 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 IBTKQ9P2D0 1353 aaPredicted RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 RNMTO43148 476 aaKnown RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 SERPINB6P35237 376 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 STAT2P52630 851 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 OR9Q1Q8NGQ5 310 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 RMDN1Q96DB5 314 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 FAM167AQ96KS9 214 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 SEPT5Q99719 369 aaPredicted RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 VPS16Q9H269 839 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 APPL1Q9UKG1 709 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 SNTNA6NMZ2 147 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 DCTN3O75935 186 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ZSCAN22P10073 491 aaPredicted RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 COPB2P35606 906 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 VPS41P49754 854 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ADKP55263 362 aaKnown RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 TP53BP2Q13625 1128 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 IDI1Q13907 227 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ZNF235Q14590 738 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 TBC1D25Q3MII6 688 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 GPIHBP1Q8IV16 184 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 KRT8P05787 483 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 RALBP11234 206 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 MAP3K7CLP57077 242 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 TRIM60Q495X7 471 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 VPS50Q96JG6 964 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 FOXP3Q9BZS1 431 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ELP3Q9H9T3 547 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 DNAI1Q9UI46 699 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 COL4A3BPQ9Y5P4 624 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 FANCAO15360 1455 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 PSMD14O00487 310 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 BAG2O95816 211 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 CTSHP09668 335 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 SKIP12755 728 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 TNNI3P19429 210 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ITGADQ13349 1161 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 ICE2Q659A1 982 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 TRMT10CQ7L0Y3 403 aaKnown RBP9.59□□□□□ -0.87
VCAN-208ENST00000512590 CCDC17Q96LX7 622 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 DNAJC11Q9NVH1 559 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 NDE1Q9NXR1 346 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
VCAN-208ENST00000512590 UHRF1BP1LA0JNW5 1464 aa9.59□□□□□ -0.88
VCAN-208ENST00000512590 ORC4O43929 436 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 SUN1O94901 812 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 PPP6R3Q5H9R7 873 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 KLHL24Q6TFL4 600 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 BZW1Q7L1Q6 419 aaKnown RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 LINS1Q8NG48 757 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ASPSCR1Q9BZE9 553 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 PANK4Q9NVE7 773 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 CFLARO15519 480 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 SKAP2O75563 359 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 KRT33AO76009 404 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms