RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 UBE3AQ05086 875 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 PPFIA1Q13136 1202 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 SPOUT1Q5T280 376 aaKnown RBP14.52□□□□□ -0.09
DDX41-215ENST00000512431 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.09
DDX41-215ENST00000512431 ANKRD45Q5TZF3 282 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 IER5Q5VY09 327 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 ERMP1Q7Z2K6 904 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 HOMER1Q86YM7 354 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 STAG2Q8N3U4 1231 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 DNAJB3Q8WWF6 145 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 MTMR8Q96EF0 704 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 INPP4AQ96PE3 977 aaPredicted RBP14.52□□□□□ -0.09
DDX41-215ENST00000512431 CDCA3Q99618 268 aaPredicted RBP14.52□□□□□ -0.09
DDX41-215ENST00000512431 AAASQ9NRG9 546 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 TUBE1Q9UJT0 475 aa14.52□□□□□ -0.09
DDX41-215ENST00000512431 SALL3Q9BXA9 1300 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 PER2O15055 1255 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
DDX41-215ENST00000512431 CD52P31358 61 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 TCF7P36402 384 aaPredicted RBP14.51□□□□□ -0.09
DDX41-215ENST00000512431 MRPS9P82933 396 aaKnown RBP14.51□□□□□ -0.09
DDX41-215ENST00000512431 GRIK4Q16099 956 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 PDE12Q6L8Q7 609 aaKnown RBP14.51□□□□□ -0.09
DDX41-215ENST00000512431 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 SENP7Q9BQF6 1050 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 KRT23Q9C075 422 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
DDX41-215ENST00000512431 ERAP1Q9NZ08 941 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 MYO7AQ13402 2215 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 ATG2AQ2TAZ0 1938 aa14.51□□□□□ -0.09
DDX41-215ENST00000512431 KMT2EQ8IZD2 1858 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 SCG2P13521 617 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 PDE1AP54750 535 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 MRPS6P82932 125 aaKnown RBP14.5□□□□□ -0.09
DDX41-215ENST00000512431 ASCL5Q7RTU5 278 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 ATP8B4Q8TF62 1192 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 SUSD6Q92537 303 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 GLG1Q92896 1179 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 TNPO1Q92973 898 aaKnown RBP14.5□□□□□ -0.09
DDX41-215ENST00000512431 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 NR2E1Q9Y466 385 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 MYH6P13533 1939 aa14.5□□□□□ -0.09
DDX41-215ENST00000512431 PRR23AA6NEV1 266 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 MARK3P27448 753 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PAK2Q13177 524 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 SEMA3FQ13275 785 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 DUSP6Q16828 381 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 IMMTQ16891 758 aaKnown RBP14.49□□□□□ -0.09
DDX41-215ENST00000512431 XRRA1Q6P2D8 792 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 RTN4RL1Q86UN2 441 aaPredicted RBP14.49□□□□□ -0.09
DDX41-215ENST00000512431 UBALD2Q8IYN6 164 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 SEPT1Q8WYJ6 367 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PIGSQ96S52 555 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 AGO3Q9H9G7 860 aaKnown RBP14.49□□□□□ -0.09
DDX41-215ENST00000512431 MAD2L2Q9UI95 211 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PCDHB7Q9Y5E2 793 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PCDHB15Q9Y5E8 787 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PCDHGC5Q9Y5F6 944 aa14.49□□□□□ -0.09
DDX41-215ENST00000512431 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 MBLAC1A4D2B0 266 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 PALM3A6NDB9 673 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 RRN3P2A6NIE6 340 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 PDGFBP01127 241 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 IBSPP21815 317 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 NBL1P41271 181 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 TECP42680 631 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 ID4P47928 161 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 IGBP1P78318 339 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 MTMR3Q13615 1198 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 THNSL1Q8IYQ7 743 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 CRIPAKQ8N1N5 446 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 KREMEN2Q8NCW0 462 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 SMARCC2Q8TAQ2 1214 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 LINC01599Q8WXQ3 324 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 CUL5Q93034 780 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 NKD2Q969F2 451 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
DDX41-215ENST00000512431 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 TSHZ2Q9NRE2 1034 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 TMEM260Q9NX78 707 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 PADI3Q9ULW8 664 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 TRPV2Q9Y5S1 764 aa14.48□□□□□ -0.09
DDX41-215ENST00000512431 FRMPD4Q14CM0 1322 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 SDSP20132 328 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 PCNX4Q63HM2 1172 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 MCTP2Q6DN12 878 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 FAM43BQ6ZT52 329 aaPredicted RBP14.47□□□□□ -0.09
DDX41-215ENST00000512431 CDHR1Q96JP9 859 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 MFSD1Q9H3U5 465 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 RIOX1Q9H6W3 641 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 PUF60Q9UHX1 559 aaKnown RBP14.47□□□□□ -0.09
DDX41-215ENST00000512431 SORCS3Q9UPU3 1222 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 TELO2Q9Y4R8 837 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 TTC3P53804 2025 aa14.47□□□□□ -0.09
DDX41-215ENST00000512431 FGF18O76093 207 aa14.46□□□□□ -0.09
DDX41-215ENST00000512431 HOXB8P17481 243 aaPredicted RBP14.46□□□□□ -0.09
DDX41-215ENST00000512431 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms