RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 EMSYQ7Z589 1322 aa8.42□□□□□ -1.06
NR1I3-231ENST00000512340 M0QZ92 97 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 PITPNM1O00562 1244 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 KIAA0355O15063 1070 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 MSH4O15457 936 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 HBP1O60381 514 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 ATP9AO75110 1047 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 TIMP1P01033 207 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 PFKMP08237 780 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 ACTN1P12814 892 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 ATP2B1P20020 1258 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 RFC2P35250 354 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 FPGSQ05932 587 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 NR5A1Q13285 461 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 PTK7Q13308 1070 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 MAPK8IP2Q13387 824 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-231ENST00000512340 LRIT3Q3SXY7 679 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 TAF2Q6P1X5 1199 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 FAM43BQ6ZT52 329 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-231ENST00000512340 FAM126BQ8IXS8 530 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 NEK9Q8TD19 979 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 SLC5A5Q92911 643 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 MBOAT7Q96N66 472 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 JPH2Q9BR39 696 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-231ENST00000512340 C16orf70Q9BSU1 422 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 UBE2OQ9C0C9 1292 aaKnown RBP8.41□□□□□ -1.06
NR1I3-231ENST00000512340 DISC1Q9NRI5 854 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 GTF2IRD1Q9UHL9 959 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 ZMYND8Q9ULU4 1186 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-231ENST00000512340 PCDHA12Q9UN75 941 aa8.41□□□□□ -1.06
NR1I3-231ENST00000512340 COL1A2P08123 1366 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 GSTTP1A0A1W2PQM5 241 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-231ENST00000512340 HAS3O00219 553 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 MAGEB2O15479 319 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 LGR5O75473 907 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 ATG7O95352 703 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 TDP2O95551 362 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 SMIM10L2AP0DMW4 78 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 SMIM10L2BP0DMW5 78 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 SYN1P17600 705 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 CDK11BP21127 795 aaKnown RBP8.4□□□□□ -1.06
NR1I3-231ENST00000512340 U2AF2P26368 475 aaKnown RBP eCLIP8.4□□□□□ -1.06
NR1I3-231ENST00000512340 TMOD1P28289 359 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 DNM2P50570 870 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 PSMC5P62195 406 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 FAAP100Q0VG06 881 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 ITGB3BPQ13352 177 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-231ENST00000512340 NPY5RQ15761 445 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 ZNF484Q5JVG2 852 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 TTC38Q5R3I4 469 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 ODR4Q5SWX8 454 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 TMEM63BQ5T3F8 832 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 SWSAP1Q6NVH7 229 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 ABHD15Q6UXT9 468 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 OTUD6AQ7L8S5 288 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 OXER1Q8TDS5 423 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 AFAP1L1Q8TED9 768 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-231ENST00000512340 KAT2BQ92831 832 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 PDLIM7Q9NR12 457 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 HDAC6Q9UBN7 1215 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 SCN10AQ9Y5Y9 1956 aa8.4□□□□□ -1.06
NR1I3-231ENST00000512340 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 CHMP2AO43633 222 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 B4GALT4O60513 344 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 PSMD10O75832 226 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 CD4P01730 458 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 P4HBP07237 508 aaKnown RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 OR52Z1P0C646 297 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 MARK3P27448 753 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 MCM7P33993 719 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TXKP42681 527 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 CDC42EP1Q00587 391 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 PPP2R5CQ13362 524 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 XKR3Q5GH77 459 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 IER5Q5VY09 327 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 HAUS3Q68CZ6 603 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 PSRC1Q6PGN9 363 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 NME8Q8N427 588 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 ATP8B4Q8TF62 1192 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 GDF15Q99988 308 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TRPV6Q9H1D0 765 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TTC12Q9H892 705 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 GJB4Q9NTQ9 266 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TRMT13Q9NUP7 481 aaKnown RBP8.39□□□□□ -1.07
NR1I3-231ENST00000512340 GABBR1Q9UBS5 961 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
NR1I3-231ENST00000512340 TBX21Q9UL17 535 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms