RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MAPK4P31152 587 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 GUCY2FP51841 1108 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 MEI1Q5TIA1 1274 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 SIRT2Q8IXJ6 389 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 TRMT44Q8IYL2 757 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 IFNL3Q8IZI9 196 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 TRIM58Q8NG06 486 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 TSC1Q92574 1164 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 FAM227BQ96M60 508 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 EFHD1Q9BUP0 239 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 RGS12O14924 1447 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CREB3O43889 395 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 PAMP19021 973 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 ARHGAP25P42331 645 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 PAPOLAP51003 745 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 BRD3Q15059 726 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 POTEDQ86YR6 584 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CMTR1Q8N1G2 835 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 UHMK1Q8TAS1 419 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 SNX2O60749 519 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CIAO1O76071 339 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 GAP43P17677 238 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CD58P19256 250 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CA4P22748 312 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 VCPP55072 806 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 DYNLT1P63172 113 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 SRRM1Q8IYB3 904 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 TCP11Q8WWU5 503 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 ULK4Q96C45 1275 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CENPKQ9BS16 269 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 DRC3Q9H069 523 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 STK17AQ9UEE5 414 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 STRIP2Q9ULQ0 834 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 NDUFB9Q9Y6M9 179 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 USP17L3A6NCW0 530 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 USP17L4A6NCW7 530 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 KCNJ18B7U540 433 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 BUB1O43683 1085 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CPB1P15086 417 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CLNS1AP54105 237 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 OCRLQ01968 901 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 SNX1Q13596 522 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 CAPRIN1Q14444 709 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 KCNJ12Q14500 433 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 ANKS3Q6ZW76 656 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 BZW1Q7L1Q6 419 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 ABHD8Q96I13 439 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 EIF2AQ9BY44 585 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 DHX36Q9H2U1 1008 aaKnown RBP6.23□□□□□ -1.41
USP38-203ENST00000511739 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 MID2Q9UJV3 735 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 TNKSO95271 1327 aa6.23□□□□□ -1.41
USP38-203ENST00000511739 GTPBP10A4D1E9 387 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 KBTBD13C9JR72 458 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ANP32DO95626 131 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ASMTLO95671 621 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 KRT1P04264 644 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 MYL1P05976 194 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PSMC2P35998 433 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 ST8SIA6P61647 398 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 BASP1P80723 227 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 IMPG1Q17R60 797 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SCARA5Q6ZMJ2 495 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ILDR1Q86SU0 546 aaPredicted RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 FAM160B2Q86V87 743 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 RUNDC3BQ96NL0 473 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 CARD6Q9BX69 1037 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PXDNLA1KZ92 1463 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ALDH1A1P00352 501 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 RCN2Q14257 317 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SDE2Q6IQ49 451 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 TBC1D19Q8N5T2 526 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 TMCO5AQ8N6Q1 288 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 OR8K1Q8NGG5 319 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 CEP19Q96LK0 163 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 POLR3CQ9BUI4 534 aaPredicted RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 MRPL47Q9HD33 250 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 BAIAP2L1Q9UHR4 511 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 E7EWF7 191 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 UBXN8O00124 270 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 HUS1O60921 280 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 DDAH1O94760 285 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 CYBBP04839 570 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 MORC3Q14149 939 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 HABP4Q5JVS0 413 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 SYDE2Q5VT97 1194 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ATG16L1Q676U5 607 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 LCA5Q86VQ0 697 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ZBTB38Q8NAP3 1195 aaPredicted RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 FANCBQ8NB91 859 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 TACO1Q9BSH4 297 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 ZSWIM6Q9HCJ5 1215 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 FBXO40Q9UH90 709 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SUN2Q9UH99 717 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms