RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ASTN1O14525 1302 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ATP9AO75110 1047 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 GUCY2CP25092 1073 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 MAPK4P31152 587 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 FANCCQ00597 558 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 LRRC63Q05C16 580 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CTTNQ14247 550 aaKnown RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CDKAL1Q5VV42 579 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 SMYD4Q8IYR2 804 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CCDC102AQ96A19 550 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ZFP91Q96JP5 570 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 SLC9A2Q9UBY0 812 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CTNND2Q9UQB3 1225 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 DIS3Q9Y2L1 958 aaKnown RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
SCLT1-209ENST00000511426 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
SCLT1-209ENST00000511426 PSAPP07602 524 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 SLC10A3P09131 477 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 PSMC6P62333 389 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 STK4Q13043 487 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 GIT2Q14161 759 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 P2RX5Q93086 422 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 MED15Q96RN5 788 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 THAP9Q9H5L6 903 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
SCLT1-209ENST00000511426 ARHGEF35A5YM69 484 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 TBCAO75347 108 aaKnown RBP16.89■□□□□ 0.29
SCLT1-209ENST00000511426 SERPINC1P01008 464 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 PTMAP06454 111 aaKnown RBP16.89■□□□□ 0.29
SCLT1-209ENST00000511426 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
SCLT1-209ENST00000511426 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 FAM114A1Q8IWE2 563 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
SCLT1-209ENST00000511426 LRRC37A2A6NM11 1700 aa16.89■□□□□ 0.29
SCLT1-209ENST00000511426 CCNE2O96020 404 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 UBASH3AP57075 661 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 SREBF2Q12772 1141 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 IRF5Q13568 498 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 TTI2Q6NXR4 508 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 MIS18BP1Q6P0N0 1132 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 PTPN18Q99952 460 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 REEP2Q9BRK0 252 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 ZNF236Q9UL36 1845 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 LRRC10BA6NIK2 292 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 ATG7O95352 703 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 EEF1GP26641 437 aaKnown RBP16.88■□□□□ 0.29
SCLT1-209ENST00000511426 ZNF131P52739 623 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 HERC4Q5GLZ8 1057 aaPredicted RBP16.88■□□□□ 0.29
SCLT1-209ENST00000511426 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
SCLT1-209ENST00000511426 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 FGD4Q96M96 766 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 PORCNQ9H237 461 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 PCDHA2Q9Y5H9 948 aa16.88■□□□□ 0.29
SCLT1-209ENST00000511426 UBE4BO95155 1302 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 PEX10O60683 326 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 MAPTP10636 758 aaKnown RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 RARRES1P49788 294 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 FILIP1LQ4L180 1135 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 WDR78Q5VTH9 848 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 SLC17A8Q8NDX2 589 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 CCDC43Q96MW1 224 aaKnown RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 TSG101Q99816 390 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 PARVGQ9HBI0 331 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-209ENST00000511426 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
SCLT1-209ENST00000511426 IGSF9BQ9UPX0 1349 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 EIF3DO15371 548 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCLT1-209ENST00000511426 FAM13AO94988 1023 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms