RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
LIN54-210ENST00000510877 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
LIN54-210ENST00000510877 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 GJA8P48165 433 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 NDUFV1P49821 464 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 MAPK6Q16659 721 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 CHD4Q14839 1912 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 CYP2C18P33260 490 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 CNNM3Q8NE01 707 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 PHF20L1A8MW92 1017 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 QARSP47897 775 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 PSMC5P62195 406 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 YAF2Q8IY57 180 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 ZBED3Q96IU2 234 aaPredicted RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 LLPHQ9BRT6 129 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 K7ERI5 159 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 ARVCFO00192 962 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 XKR3Q5GH77 459 aa13.8□□□□□ -0.2
LIN54-210ENST00000510877 LSG1Q9H089 658 aaKnown RBP13.8□□□□□ -0.2
LIN54-210ENST00000510877 EMSYQ7Z589 1322 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 TRAPPC3O43617 180 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 PDIA3P30101 505 aaKnown RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 PRPF6O94906 941 aaKnown RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 IPO7O95373 1038 aaKnown RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 TADA2AO75478 443 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
LIN54-210ENST00000510877 DSTYKQ6XUX3 929 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 GIMAP7Q8NHV1 300 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 CAGE1Q8TC20 777 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
LIN54-210ENST00000510877 SELPP16109 830 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 KCNG4Q8TDN1 519 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 COPS5Q92905 334 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 BADQ92934 168 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 MXRA8Q9BRK3 442 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 R3HDMLQ9H3Y0 253 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 SEPT11Q9NVA2 429 aaKnown RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 FBXL21Q9UKT6 434 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 SLC26A2P50443 739 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 GRB14Q14449 540 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 LENG1Q96BZ8 264 aaPredicted RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 HNRNPDLO14979 420 aaKnown RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 OSTNP61366 133 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 TSEN34Q9BSV6 310 aaKnown RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 FAM107BQ9H098 131 aa13.78□□□□□ -0.2
LIN54-210ENST00000510877 PTPRZ1P23471 2315 aaPredicted RBP13.78□□□□□ -0.2
LIN54-210ENST00000510877 IQCEQ6IPM2 695 aa13.77□□□□□ -0.2
LIN54-210ENST00000510877 RUFY1Q96T51 708 aa13.77□□□□□ -0.2
LIN54-210ENST00000510877 MTRQ99707 1265 aa13.77□□□□□ -0.2
LIN54-210ENST00000510877 LY9Q9HBG7 655 aa13.77□□□□□ -0.2
LIN54-210ENST00000510877 TMEM260Q9NX78 707 aa13.77□□□□□ -0.2
LIN54-210ENST00000510877 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 H0YGN5 161 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 COBLO75128 1261 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 ZNF484Q5JVG2 852 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 KLHL10Q6JEL2 608 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 BANK1Q8NDB2 785 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 TRIOBPQ9H2D6 2365 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 AFMP43652 599 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 OR1G1P47890 313 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 ACTR2P61160 394 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 CTTNQ14247 550 aaKnown RBP13.77□□□□□ -0.21
LIN54-210ENST00000510877 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 ELP1O95163 1332 aa13.77□□□□□ -0.21
LIN54-210ENST00000510877 CABP7Q86V35 215 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 RNF149Q8NC42 400 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms