RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756		E9PMD0	336 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	FGFR1OP	O95684	399 aa	Known RBP	13.63	□□□□□ -0.23
CAST-233	ENST00000510756	CCNE1	P24864	410 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	ZNF131	P52739	623 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	GRB14	Q14449	540 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	CDKAL1	Q5VV42	579 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	KCNN1	Q92952	543 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	PLIN2	Q99541	437 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	PTPN18	Q99952	460 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	LXN	Q9BS40	222 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	HSD3B7	Q9H2F3	369 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	VTA1	Q9NP79	307 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	SLC9A2	Q9UBY0	812 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	KCNG1	Q9UIX4	513 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	COL4A3BP	Q9Y5P4	624 aa		13.63	□□□□□ -0.23
CAST-233	ENST00000510756	TM4SF4	P48230	202 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	CNTN2	Q02246	1040 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	LRRC63	Q05C16	580 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	ALCAM	Q13740	583 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	CENPP	Q6IPU0	288 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	MIS18BP1	Q6P0N0	1132 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	C1orf186	Q6ZWK4	172 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	STAM	Q92783	540 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	THAP9	Q9H5L6	903 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	PANK4	Q9NVE7	773 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	IGKV6D-21	A0A0A0MT36	114 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	CYP2C8	P10632	490 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	CD44	P16070	742 aa	Known RBP	13.62	□□□□□ -0.23
CAST-233	ENST00000510756	ABCD1	P33897	745 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	PRCP	P42785	496 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	COASY	Q13057	564 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	GIT2	Q14161	759 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	BMT2	Q1RMZ1	405 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	ARSH	Q5FYA8	562 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	RINT1	Q6NUQ1	792 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	NFE2L3	Q9Y4A8	694 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	PCDHA2	Q9Y5H9	948 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	IVNS1ABP	Q9Y6Y0	642 aa		13.62	□□□□□ -0.23
CAST-233	ENST00000510756	IGSF9B	Q9UPX0	1349 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	LRRC10B	A6NIK2	292 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	TMEM88B	A6NKF7	163 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	FAM155A	B1AL88	458 aa	Predicted RBP	13.61	□□□□□ -0.23
CAST-233	ENST00000510756	ATP9A	O75110	1047 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	TOMM70	O94826	608 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	ALDH1A1	P00352	501 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	CASP1	P29466	404 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	FAM26F	Q5R3K3	315 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	ABHD15	Q6UXT9	468 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	OTUD6A	Q7L8S5	288 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	TPH2	Q8IWU9	490 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.61	□□□□□ -0.23
CAST-233	ENST00000510756	NELFB	Q8WX92	580 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	RGL1	Q9NZL6	768 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	IMPACT	Q9P2X3	320 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	SYNGAP1	Q96PV0	1343 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	EIF3D	O15371	548 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CAST-233	ENST00000510756	CCNE2	O96020	404 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	METTL7B	Q6UX53	244 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	STXBP4	Q6ZWJ1	553 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	PLEKHH3	Q7Z736	793 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	IFNL1	Q8IU54	200 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	FAM114A1	Q8IWE2	563 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	AFAP1L1	Q8TED9	768 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	TMEM174	Q8WUU8	243 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	P2RX5	Q93086	422 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	TRIM5	Q9C035	493 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	BHMT2	Q9H2M3	363 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	C17orf75	Q9HAS0	396 aa		13.61	□□□□□ -0.23
CAST-233	ENST00000510756	ARID2	Q68CP9	1835 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	ARHGEF35	A5YM69	484 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	HOXC6	P09630	235 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	SUPT20HL2	P0C7V6	817 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	EEF1G	P26641	437 aa	Known RBP	13.6	□□□□□ -0.23
CAST-233	ENST00000510756	NFIL3	Q16649	462 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	ISM2	Q6H9L7	571 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	KIAA0895	Q8NCT3	520 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	ANKRD20A12P	Q8NF67	263 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	EMID1	Q96A84	441 aa	Predicted RBP	13.6	□□□□□ -0.23
CAST-233	ENST00000510756	PURB	Q96QR8	312 aa	Known RBP	13.6	□□□□□ -0.23
CAST-233	ENST00000510756	MED15	Q96RN5	788 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	ST6GALNAC4	Q9H4F1	302 aa		13.6	□□□□□ -0.23
CAST-233	ENST00000510756	CHMP2A	O43633	222 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	TBCA	O75347	108 aa	Known RBP	13.59	□□□□□ -0.23
CAST-233	ENST00000510756	KRT18	P05783	430 aa	Known RBP	13.59	□□□□□ -0.23
CAST-233	ENST00000510756	RTP1	P59025	263 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	PSMC6	P62333	389 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	FANCC	Q00597	558 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	CYP4A11	Q02928	519 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	STK4	Q13043	487 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	CTTN	Q14247	550 aa	Known RBP	13.59	□□□□□ -0.23
CAST-233	ENST00000510756	TTI2	Q6NXR4	508 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	C17orf99	Q6UX52	265 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.59	□□□□□ -0.23
CAST-233	ENST00000510756	EXOC8	Q8IYI6	725 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	MYOCD	Q8IZQ8	938 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	ANKRD13C	Q8N6S4	541 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	SCFD2	Q8WU76	684 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	PORCN	Q9H237	461 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	ZFYVE28	Q9HCC9	887 aa		13.59	□□□□□ -0.23
CAST-233	ENST00000510756	LIMA1	Q9UHB6	759 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms