RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 SP9P0CG40 484 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 ADAM17P78536 824 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 PPARAQ07869 468 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 DMWDQ09019 674 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 MGAT3Q09327 533 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 TBC1D8BQ0IIM8 1120 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 TDGQ13569 410 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 USH1GQ495M9 461 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 SPOUT1Q5T280 376 aaKnown RBP15.92■□□□□ 0.14
HMGCR-208ENST00000509431 LLGL2Q6P1M3 1020 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 SIX5Q8N196 739 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 SECISBP2LQ93073 1101 aaKnown RBP15.92■□□□□ 0.14
HMGCR-208ENST00000509431 MLXIPQ9HAP2 919 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 NGRNQ9NPE2 291 aaKnown RBP15.92■□□□□ 0.14
HMGCR-208ENST00000509431 SH2B1Q9NRF2 756 aaPredicted RBP15.92■□□□□ 0.14
HMGCR-208ENST00000509431 TMEM260Q9NX78 707 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 NCDNQ9UBB6 729 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 PUF60Q9UHX1 559 aaKnown RBP15.92■□□□□ 0.14
HMGCR-208ENST00000509431 FRYLO94915 3013 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 GPR179Q6PRD1 2367 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 ABCB11O95342 1321 aa15.92■□□□□ 0.14
HMGCR-208ENST00000509431 NMT2O60551 498 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 EIF2AK2P19525 551 aaKnown RBP15.91■□□□□ 0.14
HMGCR-208ENST00000509431 ARHGAP4P98171 946 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 FBXO47Q5MNV8 452 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 VARS2Q5ST30 1063 aaKnown RBP15.91■□□□□ 0.14
HMGCR-208ENST00000509431 PLPP4Q5VZY2 271 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 RUFY4Q6ZNE9 571 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 THNSL1Q8IYQ7 743 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 LINC01599Q8WXQ3 324 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 RIN2Q8WYP3 895 aaPredicted RBP15.91■□□□□ 0.14
HMGCR-208ENST00000509431 RALYQ9UKM9 306 aaKnown RBP15.91■□□□□ 0.14
HMGCR-208ENST00000509431 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGCR-208ENST00000509431 SQORQ9Y6N5 450 aa15.91■□□□□ 0.14
HMGCR-208ENST00000509431 STK25O00506 426 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 EOMESO95936 686 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 RPLP2P05387 115 aaKnown RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 TOP1P11387 765 aaKnown RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 SCG2P13521 617 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 RFX1P22670 979 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 KIAA1841Q6NSI8 718 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 FAM43BQ6ZT52 329 aaPredicted RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 LMBR1Q8WVP7 490 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 ACSF2Q96CM8 615 aaPredicted RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 NAPBQ9H115 298 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 PXMP2Q9NR77 195 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 CDH22Q9UJ99 828 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 DBR1Q9UK59 544 aaKnown RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
HMGCR-208ENST00000509431 LRFN2Q9ULH4 789 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 NRCAMQ92823 1304 aa15.9■□□□□ 0.14
HMGCR-208ENST00000509431 FNDC1Q4ZHG4 1894 aaPredicted RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 DCDC2BA2VCK2 349 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 ARP10275 920 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 HSPD1P10809 573 aaKnown RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 PDHBP11177 359 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 ATAT1Q5SQI0 421 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
HMGCR-208ENST00000509431 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 TCF25Q9BQ70 676 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 ENTPD7Q9NQZ7 604 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 WNT16Q9UBV4 365 aa15.89■□□□□ 0.13
HMGCR-208ENST00000509431 SPTLC1O15269 473 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 RAB11FIP3O75154 756 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 PLCB3Q01970 1234 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 ZNF543Q08ER8 600 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
HMGCR-208ENST00000509431 C1orf210Q8IVY1 113 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 ITPRIPQ8IWB1 547 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 KBTBD3Q8NAB2 608 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 COLGALT1Q8NBJ5 622 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 CACNA1IQ9P0X4 2223 aa15.88■□□□□ 0.13
HMGCR-208ENST00000509431 DENND4AQ7Z401 1863 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
HMGCR-208ENST00000509431 SORBS3O60504 671 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
HMGCR-208ENST00000509431 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
HMGCR-208ENST00000509431 GPR20Q99678 358 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 TMEM47Q9BQJ4 181 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 DZANK1Q9NVP4 752 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
HMGCR-208ENST00000509431 HCFC2Q9Y5Z7 792 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 CDY2AQ9Y6F7 541 aa15.87■□□□□ 0.13
HMGCR-208ENST00000509431 MYH6P13533 1939 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 HIDE1A8MVS5 230 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 LAG3P18627 525 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 CD52P31358 61 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 SP2Q02086 613 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 GPATCH4Q5T3I0 446 aaKnown RBP15.86■□□□□ 0.13
HMGCR-208ENST00000509431 OTOP3Q7RTS5 596 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 PDCD2LQ9BRP1 358 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
HMGCR-208ENST00000509431 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms