RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 PHF24Q9UPV7 400 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 HOXD8P13378 290 aaPredicted RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 MARK3P27448 753 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 UBA7P41226 1012 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 QARSP47897 775 aaKnown RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 SLC26A2P50443 739 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 PSMC5P62195 406 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 SPIRE1Q08AE8 756 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 ZRSR1Q15695 479 aaKnown RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 TPH2Q8IWU9 490 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 NEK9Q8TD19 979 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 EIF2AK1Q9BQI3 630 aaKnown RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 SENP6Q9GZR1 1112 aaPredicted RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
RNF4-213ENST00000509388 EMSYQ7Z589 1322 aa16.65■□□□□ 0.26
RNF4-213ENST00000509388 IGKV6D-21A0A0A0MT36 114 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
RNF4-213ENST00000509388 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CUTAO60888 179 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 LGR5O75473 907 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 TXLNAP40222 546 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CCT6AP40227 531 aaKnown RBP16.64■□□□□ 0.25
RNF4-213ENST00000509388 PSEN2P49810 448 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 SOX10P56693 466 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CYP4A11Q02928 519 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 MFSD10Q14728 455 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 TRMT1LQ7Z2T5 733 aaKnown RBP16.64■□□□□ 0.25
RNF4-213ENST00000509388 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 BANK1Q8NDB2 785 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 LEO1Q8WVC0 666 aaPredicted RBP16.64■□□□□ 0.25
RNF4-213ENST00000509388 DYDC2Q96IM9 177 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CDK5RAP3Q96JB5 506 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 C16orf70Q9BSU1 422 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 C11orf49Q9H6J7 331 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 NRBP2Q9NSY0 501 aa16.64■□□□□ 0.25
RNF4-213ENST00000509388 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 F2P00734 622 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 CTTNQ14247 550 aaKnown RBP16.63■□□□□ 0.25
RNF4-213ENST00000509388 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 C7orf31Q8N865 590 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
RNF4-213ENST00000509388 FAM167AQ96KS9 214 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 PCYT2Q99447 389 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 LXNQ9BS40 222 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 GDPD2Q9HCC8 539 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 TUFT1Q9NNX1 390 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
RNF4-213ENST00000509388 MAFBQ9Y5Q3 323 aaPredicted RBP16.63■□□□□ 0.25
RNF4-213ENST00000509388 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
RNF4-213ENST00000509388 PP2D1A8MPX8 630 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 SLITRK3O94933 977 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 CDC25AP30304 524 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 PSMC6P62333 389 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 GRIN1Q05586 938 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 ITGA7Q13683 1181 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 CABP7Q86V35 215 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 DIS3LQ8TF46 1054 aaKnown RBP16.62■□□□□ 0.25
RNF4-213ENST00000509388 KAT2BQ92831 832 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 CALML4Q96GE6 196 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
RNF4-213ENST00000509388 HSD17B14Q9BPX1 270 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
RNF4-213ENST00000509388 SEZ6LQ9BYH1 1024 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 PCDHA7Q9UN72 937 aa16.62■□□□□ 0.25
RNF4-213ENST00000509388 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 DDX11L8A8MPP1 907 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 OATP04181 439 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 RPA1P27694 616 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 ATN1P54259 1190 aaPredicted RBP16.61■□□□□ 0.25
RNF4-213ENST00000509388 PRKCEQ02156 737 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 NBPF20Q3BBV1 942 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 XKR3Q5GH77 459 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 CATSPER3Q86XQ3 398 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
RNF4-213ENST00000509388 ATP8B4Q8TF62 1192 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 BBXQ8WY36 941 aaPredicted RBP16.61■□□□□ 0.25
RNF4-213ENST00000509388 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 RNPEPQ9H4A4 650 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms