RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 HMGN5P82970 282 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 ZNF618Q5T7W0 954 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 PIK3AP1Q6ZUJ8 805 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC17A8Q8NDX2 589 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 DHX38Q92620 1227 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 C8orf76Q96K31 380 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 MBOAT7Q96N66 472 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 TTYH1Q9H313 450 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 SMARCAD1Q9H4L7 1026 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 ZNF576Q9H609 170 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC28A3Q9HAS3 691 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC9A2Q9UBY0 812 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 TCEAL9Q9UHQ7 104 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 TRIP12Q14669 1992 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 GSTTP1A0A1W2PQM5 241 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 RSPH10B2B2RC85 870 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 MEIS1O00470 390 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 BACH1O14867 736 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 DHX15O43143 795 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 TREHO43280 583 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 CTSHP09668 335 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 RSPH10BP0C881 870 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 FOSL2P15408 326 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 KRT2P35908 639 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 RABGGTBP53611 331 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 IGBP1P78318 339 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 PPFIA1Q13136 1202 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 SERINC5Q86VE9 423 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 MYLIPQ8WY64 445 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 TNPO1Q92973 898 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 CTAGE1Q96RT6 745 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 NKX2-4Q9H2Z4 354 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 AGO4Q9HCK5 861 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 ERAP1Q9NZ08 941 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
PDLIM5-213ENST00000509357 NFASCO94856 1347 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 NRCAMQ92823 1304 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 BAIAP3O94812 1187 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 CCNE2O96020 404 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 SYT1P21579 422 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 U2AF2P26368 475 aaKnown RBP eCLIP9.9□□□□□ -0.822e-9■■■■■ 29.5
PDLIM5-213ENST00000509357 DDIT3P35638 169 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 STAT5BP51692 787 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 ACTR2P61160 394 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 IKBKEQ14164 716 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 HIC1Q14526 733 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 PRR16Q569H4 304 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 PPP2R2DQ66LE6 453 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 FAM173BQ6P4H8 233 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 CNKSR3Q6P9H4 555 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 RSPH3Q86UC2 560 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 WNT8BQ93098 351 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 INTS4Q96HW7 963 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 PCYT2Q99447 389 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 ZNF577Q9BSK1 485 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 TMEM60Q9H2L4 133 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 SMC3Q9UQE7 1217 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 MTMR6Q9Y217 621 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 ZDHHC9Q9Y397 364 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 PCDHA11Q9Y5I1 949 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 SIP14410 1827 aa9.9□□□□□ -0.82
PDLIM5-213ENST00000509357 EMSYQ7Z589 1322 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 CYP3A7-CYP3A51PA0A087WV96 503 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 IPO5O00410 1097 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 MSH4O15457 936 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 NBNO60934 754 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 EFCAB14O75071 495 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 LGR5O75473 907 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 MYOGP15173 224 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 XBP1P17861 261 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 IGFBP4P22692 258 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 CYP3A7P24462 503 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 SETQ01105 290 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 RBL2Q08999 1139 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 RESTQ13127 1097 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 NONOQ15233 471 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 GRIK4Q16099 956 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 TRIM71Q2Q1W2 868 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 FAM160B1Q5W0V3 765 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 MIS18BP1Q6P0N0 1132 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 B3GNT9Q6UX72 402 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 NIPA1Q7RTP0 329 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 HSCBQ8IWL3 235 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms