RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 MYOCDQ8IZQ8 938 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 EMILIN3Q9NT22 766 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 FRMD3A2A2Y4 597 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 E9PMD0 336 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 MEIS1O00470 390 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 PSMD10O75832 226 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 BCRP11274 1271 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 HERVK_113P62684 666 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 SPA17Q15506 151 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 NIPA1Q7RTP0 329 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 KRT26Q7Z3Y9 468 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 SYT2Q8N9I0 419 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 MAF1Q9H063 256 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 DNM3Q9UQ16 869 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 FRMPD4Q14CM0 1322 aa12.77□□□□□ -0.37
PRPF40B-203ENST00000508736 C19orf81C9J6K1 198 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 PTPRAP18433 802 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 CYP11B2P19099 503 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 HNRNPH3P31942 346 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 STAT3P40763 770 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 MTMR2Q13614 643 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 MAP1SQ66K74 1059 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 NCAPH2Q6IBW4 605 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 PICK1Q9NRD5 415 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 AGPAT5Q9NUQ2 364 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 PANK4Q9NVE7 773 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 ZBED4O75132 1171 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 FLOT1O75955 427 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 GNA14O95837 355 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 OAZ1P54368 228 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 AMPD2Q01433 879 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 KIF5AQ12840 1032 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 COASYQ13057 564 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 SPP2Q13103 211 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 FAM26FQ5R3K3 315 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 B3GNT9Q6UX72 402 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 HNRNPLLQ8WVV9 542 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 RIT2Q99578 217 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 HSD17B14Q9BPX1 270 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
PRPF40B-203ENST00000508736 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 SEC31AO94979 1220 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 KLK7P49862 253 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 VAV2P52735 878 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 TERF2Q15554 542 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 ZNF771Q7L3S4 317 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 GPBP1Q86WP2 473 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 EEF2KMTQ96G04 330 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 MXRA8Q9BRK3 442 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms