RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SIP14410 1827 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 IGSF9BQ9UPX0 1349 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 WDR64B1ANS9 1081 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 H3BRB1 525 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 KPNA6O60684 536 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 SLITRK3O94933 977 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 CDC25AP30304 524 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 HOXC8P31273 242 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 PRPHP41219 470 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 TECP42680 631 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 RGS19P49795 217 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 MFSD10Q14728 455 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 EPHA7Q15375 998 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 ECM1Q16610 540 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 KIAA0753Q2KHM9 967 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 PLPPR4Q7Z2D5 763 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 MIER3Q7Z3K6 550 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 NECAB2Q7Z6G3 386 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 LINC00301Q8NCQ3 95 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 LRRC15Q8TF66 581 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 GABBR1Q9UBS5 961 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-220ENST00000508715 SCN5AQ14524 2016 aa11.65□□□□□ -0.54
PTPN20-220ENST00000508715 A0A087WWV3 80 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 LAD1O00515 517 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ZBTB39O15060 712 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ZEB2O60315 1214 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 MED24O75448 989 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 BAG4O95429 457 aaKnown RBP11.64□□□□□ -0.55
PTPN20-220ENST00000508715 MARK3P27448 753 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-220ENST00000508715 STAT5BP51692 787 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 JAK3P52333 1124 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ADAM17P78536 824 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 NCAPH2Q6IBW4 605 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
PTPN20-220ENST00000508715 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 HDAC6Q9UBN7 1215 aa11.64□□□□□ -0.55
PTPN20-220ENST00000508715 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-220ENST00000508715 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 ARVCFO00192 962 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CAPN15O75808 1086 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CABYRO75952 493 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CD4P01730 458 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 PSAPP07602 524 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 SFNP31947 248 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 NUCB2P80303 420 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CTTNQ14247 550 aaKnown RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 PDIA5Q14554 519 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 MARCH8Q5T0T0 291 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 FAM126BQ8IXS8 530 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 ZBTB10Q96DT7 871 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-220ENST00000508715 MYH11P35749 1972 aa11.63□□□□□ -0.55
PTPN20-220ENST00000508715 A0A0U1RQG5 324 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-220ENST00000508715 BACH1O14867 736 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 MARCH6O60337 910 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 B4GALT4O60513 344 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 RTP1P59025 263 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 PRKCEQ02156 737 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 TLE2Q04725 743 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 GDF6Q6KF10 455 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-220ENST00000508715 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms