RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 PPP1R9AQ9ULJ8 1098 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 ATXN7L1Q9ULK2 861 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-207ENST00000508550 MRVI1Q9Y6F6 885 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 GCOM1H8Y6P7 765 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 POLR2DO15514 142 aaKnown RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 MAFGO15525 162 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 ZBED4O75132 1171 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 TPM3P06753 285 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 POLR2MP0CAP2 368 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 MCM7P33993 719 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 SOX11P35716 441 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 SLC16A2P36021 539 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 UBA7P41226 1012 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 ZNF165P49910 485 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 HSD17B4P51659 736 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 TPM4P67936 248 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 SETQ01105 290 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 PPATQ06203 517 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 IKQ13123 557 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 POSTNQ15063 836 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 CAMK4Q16566 473 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 LETM2Q2VYF4 491 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 LONRF3Q496Y0 759 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 COBLL1Q53SF7 1204 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 OXLD1Q5BKU9 147 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 EFHC2Q5JST6 749 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 FAM83BQ5T0W9 1011 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 FOXR2Q6PJQ5 311 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 LBX2Q6XYB7 198 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 CLIC6Q96NY7 704 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 WRNIP1Q96S55 665 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 FEZ1Q99689 392 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 RUBCNLQ9H714 662 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 KCNMB3Q9NPA1 279 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 DISC1Q9NRI5 854 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 GDF2Q9UK05 429 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-207ENST00000508550 AFG3L2Q9Y4W6 797 aa9.09□□□□□ -0.95
CCSER1-207ENST00000508550 SHTN1A0MZ66 631 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 VWA3AA6NCI4 1184 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 STAM2O75886 525 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 DDNO94850 711 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 ITGB2P05107 769 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 COPB2P35606 906 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 KCNB1Q14721 858 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 COG2Q14746 738 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 TLR1Q15399 786 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 CALCRLQ16602 461 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 KRT26Q7Z3Y9 468 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 CLEC10AQ8IUN9 316 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 ANO3Q9BYT9 981 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 KBTBD4Q9NVX7 518 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 TMOD4Q9NZQ9 345 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 BIN2Q9UBW5 565 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 DDX25Q9UHL0 483 aaKnown RBP9.08□□□□□ -0.96
CCSER1-207ENST00000508550 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
CCSER1-207ENST00000508550 FRMPD4Q14CM0 1322 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 KDM3AQ9Y4C1 1321 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 GOLGA6L19H0YKK7 550 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 C2CD2LO14523 706 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP2O75604 605 aaPredicted RBP9.07□□□□□ -0.96
CCSER1-207ENST00000508550 VCAM1P19320 739 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 EPHX2P34913 555 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 SMTNP53814 917 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 GDF10P55107 478 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 IQCB1Q15051 598 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
CCSER1-207ENST00000508550 PLA2G4EQ3MJ16 856 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 ANO6Q4KMQ2 910 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 JAKMIP3Q5VZ66 844 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 KRT79Q5XKE5 535 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 HAUS3Q68CZ6 603 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 CATSPERGQ6ZRH7 1159 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 LDHDQ86WU2 507 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 CKAP2LQ8IYA6 745 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 ZNF295-AS1Q8N0V1 137 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 PLPP7Q8NBV4 271 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 PIBF1Q8WXW3 757 aa9.07□□□□□ -0.96
CCSER1-207ENST00000508550 SMARCE1Q969G3 411 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms