RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZSWIM5Q9P217 1185 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 NRCAMQ92823 1304 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-211ENST00000508546 ENPP3O14638 875 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 DGKIO75912 1065 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 NDUFV1P49821 464 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 NUBP1P53384 320 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 MGAT3Q09327 533 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 COASYQ13057 564 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 BTG3Q14201 252 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-211ENST00000508546 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 TAF2Q6P1X5 1199 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 EFHBQ8N7U6 833 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 TMEM105Q8N8V8 129 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 IGFLR1Q9H665 355 aa10.88□□□□□ -0.67
NEDD9-211ENST00000508546 OTOGLQ3ZCN5 2332 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 CSPG5O95196 566 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 GHRP10912 638 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 ARHGAP4P98171 946 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 COL9A2Q14055 689 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 LPIN1Q14693 890 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 CYFIP1Q7L576 1253 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 CMTR2Q8IYT2 770 aaKnown RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 SENP7Q9BQF6 1050 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 KRT23Q9C075 422 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 CLEC1BQ9P126 229 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 RALYQ9UKM9 306 aaKnown RBP10.87□□□□□ -0.67
NEDD9-211ENST00000508546 FAM208BQ5VWN6 2430 aa10.87□□□□□ -0.67
NEDD9-211ENST00000508546 FIBPO43427 364 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 ITGB1P05556 798 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-211ENST00000508546 SDSP20132 328 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 DNAJB1P25685 340 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 SEC23AQ15436 765 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 PTPN21Q16825 1174 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 FBXO47Q5MNV8 452 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 IFIT1BQ5T764 474 aaKnown RBP10.86□□□□□ -0.67
NEDD9-211ENST00000508546 TSHZ1Q6ZSZ6 1077 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 RSPH3Q86UC2 560 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 CRIPAKQ8N1N5 446 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 PHF7Q9BWX1 381 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-211ENST00000508546 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 CNNM2Q9H8M5 875 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
NEDD9-211ENST00000508546 EVPLQ92817 2033 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 MBLAC1A4D2B0 266 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 GLP2RO95838 553 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 ATF7P17544 494 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 ST3GAL2Q16842 350 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 IMMTQ16891 758 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 RUFY4Q6ZNE9 571 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 ADGRD2Q7Z7M1 963 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 RILPL2Q969X0 211 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 RIPOR3Q96MK2 946 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
NEDD9-211ENST00000508546 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 SUPT16HQ9Y5B9 1047 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 MRPL42Q9Y6G3 142 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 FASNP49327 2511 aaKnown RBP10.85□□□□□ -0.67
NEDD9-211ENST00000508546 FRYLO94915 3013 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 PPFIA1Q13136 1202 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 PUM1Q14671 1186 aaKnown RBP eCLIP10.84□□□□□ -0.67
NEDD9-211ENST00000508546 XRRA1Q6P2D8 792 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 KLHL23Q8NBE8 558 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 GIMAP8Q8ND71 665 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-211ENST00000508546 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 LINC01599Q8WXQ3 324 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 RPGRIP1Q96KN7 1286 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 PIGSQ96S52 555 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 FTHL17Q9BXU8 183 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 AGO3Q9H9G7 860 aaKnown RBP10.84□□□□□ -0.67
NEDD9-211ENST00000508546 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 TELO2Q9Y4R8 837 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms