RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 EHMT1Q9H9B1 1298 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 AGO4Q9HCK5 861 aaKnown RBP18.53■□□□□ 0.56
LMNA-222ENST00000508500 JPH1Q9HDC5 661 aaPredicted RBP18.53■□□□□ 0.56
LMNA-222ENST00000508500 ERAP1Q9NZ08 941 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 SLC9A2Q9UBY0 812 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 NFASCO94856 1347 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 RALGAPA2Q2PPJ7 1873 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.52■□□□□ 0.56
LMNA-222ENST00000508500 LINC01553A4QN01 128 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 FAM86B1E9PN63 330 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 PRPF3O43395 683 aaKnown RBP18.52■□□□□ 0.56
LMNA-222ENST00000508500 EFCAB14O75071 495 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 FAM86B2P0C5J1 330 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 SCG2P13521 617 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 EVCP57679 992 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 FGD1P98174 961 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 MGAT3Q09327 533 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 GRB10Q13322 594 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 AP3B2Q13367 1082 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 GRIK4Q16099 956 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 JAKMIP3Q5VZ66 844 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 RPAINQ86UA6 219 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 PHKBQ93100 1093 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 RAD9AQ99638 391 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 SMARCAD1Q9H4L7 1026 aa18.52■□□□□ 0.56
LMNA-222ENST00000508500 MYO7AQ13402 2215 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 IGLV3-22A0A075B6J6 115 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 MBLAC1A4D2B0 266 aaPredicted RBP18.51■□□□□ 0.55
LMNA-222ENST00000508500 ATG7O95352 703 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 ACTR2P61160 394 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
LMNA-222ENST00000508500 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
LMNA-222ENST00000508500 MICALL1Q8N3F8 863 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 GLG1Q92896 1179 aa18.51■□□□□ 0.55
LMNA-222ENST00000508500 ESYT2A0FGR8 921 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 DHX15O43143 795 aaKnown RBP18.5■□□□□ 0.55
LMNA-222ENST00000508500 EDIL3O43854 480 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 REC8O95072 547 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 CCNE2O96020 404 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 INSRRP14616 1297 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
LMNA-222ENST00000508500 TFF2Q03403 129 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 PLCB4Q15147 1175 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 UHRF1Q96T88 793 aaPredicted RBP18.5■□□□□ 0.55
LMNA-222ENST00000508500 NCOA5Q9HCD5 579 aaKnown RBP18.5■□□□□ 0.55
LMNA-222ENST00000508500 ZSWIM6Q9HCJ5 1215 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 KIAA1671Q9BY89 1806 aa18.5■□□□□ 0.55
LMNA-222ENST00000508500 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 CYP3A4P08684 503 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 COL9A1P20849 921 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 ERVK-21P61565 698 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
LMNA-222ENST00000508500 MYOCDQ8IZQ8 938 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
LMNA-222ENST00000508500 RASGRP4Q8TDF6 673 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 GDPD5Q8WTR4 605 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 TRAPPC12Q8WVT3 735 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 DNAJB3Q8WWF6 145 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 SEPT8Q92599 483 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 TOP1MTQ969P6 601 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
LMNA-222ENST00000508500 UIMC1Q96RL1 719 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 GLT8D2Q9H1C3 349 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 SUGCTQ9HAC7 445 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 TUBE1Q9UJT0 475 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 COL4A6Q14031 1691 aa18.49■□□□□ 0.55
LMNA-222ENST00000508500 AMHP03971 560 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 PSMA5P28066 241 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 IGBP1P78318 339 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 LPIN1Q14693 890 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 TAF2Q6P1X5 1199 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 RUFY3Q7L099 469 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 NIPA1Q7RTP0 329 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 PLPPR4Q7Z2D5 763 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 SDF4Q9BRK5 362 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 MTUS1Q9ULD2 1270 aa18.48■□□□□ 0.55
LMNA-222ENST00000508500 DDX39AO00148 427 aaKnown RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 GHRP10912 638 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 IFNAR1P17181 557 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 STAT5BP51692 787 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 KCNQ1P51787 676 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 ABHD15Q6UXT9 468 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 C17orf80Q9BSJ5 609 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 RNF26Q9BY78 433 aaPredicted RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 IFIH1Q9BYX4 1025 aaKnown RBP18.47■□□□□ 0.55
LMNA-222ENST00000508500 INSL6Q9Y581 213 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 CDY2AQ9Y6F7 541 aa18.47■□□□□ 0.55
LMNA-222ENST00000508500 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
LMNA-222ENST00000508500 UPP2O95045 317 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 ATP4AP20648 1035 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms