RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 CCNE2O96020 404 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 XRCC6P12956 609 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP46-207ENST00000508499 CMA1P23946 247 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 RPA1P27694 616 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 TECP42680 631 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 TXKP42681 527 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 CPT1AP50416 773 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 EPHA7Q15375 998 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 ABHD15Q6UXT9 468 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 DHX37Q8IY37 1157 aaKnown RBP9.72□□□□□ -0.85
USP46-207ENST00000508499 ERMNQ8TAM6 284 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 GPR20Q99678 358 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
USP46-207ENST00000508499 TUFT1Q9NNX1 390 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 DDX20Q9UHI6 824 aaKnown RBP9.72□□□□□ -0.85
USP46-207ENST00000508499 TCEAL9Q9UHQ7 104 aa9.72□□□□□ -0.85
USP46-207ENST00000508499 KAT6AQ92794 2004 aa9.71□□□□□ -0.85
USP46-207ENST00000508499 IGSF9BQ9UPX0 1349 aa9.71□□□□□ -0.85
USP46-207ENST00000508499 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.85
USP46-207ENST00000508499 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 GSTTP1A0A1W2PQM5 241 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 GOLGA6L22H0YM25 854 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 CTAGE5O15320 804 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 MARCH6O60337 910 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 DKC1O60832 514 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP46-207ENST00000508499 RARBP10826 455 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 NCLP19338 710 aaKnown RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 PTMSP20962 102 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 MARCKSP29966 332 aaPredicted RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 ME1P48163 572 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 ACTR2P61160 394 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 CEBPZQ03701 1054 aaKnown RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 TRIM32Q13049 653 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 HSDL1Q3SXM5 330 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 BRDTQ58F21 947 aaPredicted RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 PRAMEF19Q5SWL8 479 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 CCSAPQ6IQ19 270 aaPredicted RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 CYFIP1Q7L576 1253 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 PLPPR4Q7Z2D5 763 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 TLK2Q86UE8 772 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 KLHDC9Q8NEP7 349 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 UNC45AQ9H3U1 944 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 MLXIPQ9HAP2 919 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 DISC1Q9NRI5 854 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 LRWD1Q9UFC0 647 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 HPSEQ9Y251 543 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 PPME1Q9Y570 386 aa9.71□□□□□ -0.86
USP46-207ENST00000508499 MAFBQ9Y5Q3 323 aaPredicted RBP9.71□□□□□ -0.86
USP46-207ENST00000508499 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 PSAPP07602 524 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 MMP3P08254 477 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 SUPT20HL2P0C7V6 817 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 CCND3P30281 292 aaPredicted RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 UBE2HP62256 183 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 PLCB2Q00722 1185 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 DGKDQ16760 1214 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 FOXD4L6Q3SYB3 417 aaPredicted RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 MIS18BP1Q6P0N0 1132 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 SHC4Q6S5L8 630 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 FOXD4L3Q6VB84 417 aaPredicted RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 C4orf19Q8IY42 314 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 ATP6V0A1Q93050 837 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 SPATA33Q96N06 139 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 MMTAG2Q9BU76 263 aaKnown RBP9.7□□□□□ -0.86
USP46-207ENST00000508499 SEZ6LQ9BYH1 1024 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP46-207ENST00000508499 CSRNP2Q9H175 543 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 CUEDC2Q9H467 287 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 USP25Q9UHP3 1055 aa9.7□□□□□ -0.86
USP46-207ENST00000508499 SYNRGQ9UMZ2 1314 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 EML1O00423 815 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 NOP56O00567 594 aaKnown RBP9.69□□□□□ -0.86
USP46-207ENST00000508499 SLITRK3O94933 977 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 F2P00734 622 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 GJB1P08034 283 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 TCF7P36402 384 aaPredicted RBP9.69□□□□□ -0.86
USP46-207ENST00000508499 TXLNAP40222 546 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 UBA7P41226 1012 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 QARSP47897 775 aaKnown RBP9.69□□□□□ -0.86
USP46-207ENST00000508499 PSMC5P62195 406 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 GRIN1Q05586 938 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 FSCN1Q16658 493 aaKnown RBP9.69□□□□□ -0.86
USP46-207ENST00000508499 TMEM63BQ5T3F8 832 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 MIER3Q7Z3K6 550 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
USP46-207ENST00000508499 PCSK9Q8NBP7 692 aaKnown RBP9.69□□□□□ -0.86
USP46-207ENST00000508499 OR6J1Q8NGC5 347 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms