RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TOM1L1O75674 476 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CIAO1O76071 339 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PDE6AP16499 860 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MARK3P27448 753 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PICALMQ13492 652 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT28Q7Z3Y7 464 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 LONP2Q86WA8 852 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PDIK1LQ8N165 341 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF713Q8N859 430 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PYROXD1Q8WU10 500 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CEP19Q96LK0 163 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MAST3O60307 1309 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 UBN2Q6ZU65 1347 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TTC26A0AVF1 554 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 CPP00450 1065 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 NCF2P19878 526 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SH2D3CQ8N5H7 860 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SMCR8Q8TEV9 937 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 THAP11Q96EK4 314 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ADAMTS1Q9UHI8 967 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SMG5Q9UPR3 1016 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PCDHB6Q9Y5E3 794 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 COPEO14579 308 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PGM1P36871 562 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 NT5C2P49902 561 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 COPS2P61201 443 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 MRPS25P82663 173 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TMPRSS15P98073 1019 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TFAP4Q01664 338 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 STAT4Q14765 748 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TSGA10IPQ3SY00 556 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 CYB5RLQ6IPT4 315 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PPM1KQ8N3J5 372 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DACT3Q96B18 629 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 NT5C1BQ96P26 610 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PRMT1Q99873 361 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PHF23Q9BUL5 403 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ROPN1BQ9BZX4 212 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SH2D4AQ9H788 454 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PPCSQ9HAB8 311 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ROPN1Q9HAT0 212 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ZBTB21Q9ULJ3 1066 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 AFG3L2Q9Y4W6 797 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 WDR91A4D1P6 747 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TCP11X1B4DZS4 312 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 EXOC5O00471 708 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TEX33O43247 280 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TMCC1O94876 653 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ANP32DO95626 131 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT75O95678 551 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 P4HA1P13674 534 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 CD19P15391 556 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SERPINB10P48595 397 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ADRM1Q16186 407 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PARP10Q53GL7 1025 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TRMT10CQ7L0Y3 403 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM178BQ8IXR5 827 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM186BQ8IYM0 893 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 KIAA2013Q8IYS2 634 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 MYCBPAPQ8TBZ2 947 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 RNPC3Q96LT9 517 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ZIM3Q96PE6 472 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DBNLQ9UJU6 430 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TRIM33Q9UPN9 1127 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DENND4BO75064 1496 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 MBD5Q9P267 1494 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 LRRC53A6NM62 1247 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 GNGT2O14610 69 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DNAJC6O75061 913 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 GNAT1P11488 350 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 NQO1P15559 274 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ANXA13P27216 316 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 HIC1Q14526 733 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 KAZNQ674X7 775 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 RNF207Q6ZRF8 634 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ARHGAP22Q7Z5H3 698 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 LCA5Q86VQ0 697 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 REXO1L1PQ8IX06 675 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 CMTR1Q8N1G2 835 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 STAG2Q8N3U4 1231 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 TC2NQ8N9U0 490 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 MXD3Q9BW11 206 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 GCNT4Q9P109 453 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 DDX25Q9UHL0 483 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 SNX5Q9Y5X3 404 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 ERVK-7P63135 1459 aa7.86□□□□□ -1.15
UBE2D3-224ENST00000508474 PHF20L1A8MW92 1017 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 IGF2BP3O00425 579 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 GFPT2O94808 682 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 SCTRP47872 440 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 ARL4CP56559 192 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 NR1I3Q14994 352 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms