RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BAG2O95816 211 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TNNC2P02585 160 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ATP5JP18859 108 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 OR1G1P47890 313 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 NUCB1Q02818 461 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PLCB4Q15147 1175 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TSNAXIP1Q2TAA8 658 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 NAALADL2Q58DX5 795 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MUM1L1Q5H9M0 696 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CATSPER4Q7RTX7 472 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GLYCTKQ8IVS8 523 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 NME8Q8N427 588 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FSIP1Q8NA03 581 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FAM122AQ96E09 287 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CEP95Q96GE4 821 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ZSCAN31Q96LW9 406 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FRMD6Q96NE9 622 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 IWS1Q96ST2 819 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TLR7Q9NYK1 1049 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.25□□□□□ -1.893e-7■■■■■ 29.4
NEDD4-208ENST00000508342 RBM8AQ9Y5S9 174 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 DSG3P32926 999 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TM4SF4P48230 202 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 APOBRQ0VD83 1088 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 UBE2SQ16763 222 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC83Q8IWF9 413 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 NSUN4Q96CB9 384 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TMEM87BQ96K49 555 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SPACA7Q96KW9 195 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TTC12Q9H892 705 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SRRDQ9UH36 339 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 DPP7Q9UHL4 492 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SLC8A2Q9UPR5 921 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CACNA1GO43497 2377 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 OATP04181 439 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FAM200BP0CF97 657 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 DNAJB2P25686 324 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PSEN1P49768 467 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PLD1Q13393 1074 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 RAPGEF1Q13905 1077 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 HIC1Q14526 733 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 OLFML2BQ68BL8 750 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TMED8Q6PL24 325 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PIK3AP1Q6ZUJ8 805 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 KRT77Q7Z794 578 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MYCT1Q8N699 235 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 KBTBD3Q8NAB2 608 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GPKOWQ92917 476 aaPredicted RBP eCLIP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ATG4CQ96DT6 458 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF700Q9H0M5 742 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 NUP62CLQ9H1M0 184 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SNX25Q9H3E2 840 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SMARCAD1Q9H4L7 1026 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PIN4Q9Y237 131 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GDAQ9Y2T3 454 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 WTIPA6NIX2 430 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TMCO5BA8MYB1 307 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 IGKV5-2P06315 115 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 HOXA10P31260 410 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PHKA2P46019 1235 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ATXN3P54252 364 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PPP2R3AQ06190 1150 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TTC22Q5TAA0 569 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PLPP4Q5VZY2 271 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ARMCX5Q6P1M9 558 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PI16Q6UXB8 463 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ARMCX2Q7L311 632 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 AMIGO3Q86WK7 504 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CMTR1Q8N1G2 835 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CCT6BQ92526 530 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 APBB2Q92870 758 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ANKRD36BP1Q96IX9 119 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FAM167AQ96KS9 214 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC77Q9BR77 488 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TNMDQ9H2S6 317 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 VCPKMTQ9H867 229 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GABRQQ9UN88 632 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 EMSYQ7Z589 1322 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 RRN3P2A6NIE6 340 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CPB1P15086 417 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TRIM60Q495X7 471 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 KRT79Q5XKE5 535 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PARD3BQ8TEW8 1205 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SNX19Q92543 992 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PIGSQ96S52 555 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PPP1R9BQ96SB3 815 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 AFG3L2Q9Y4W6 797 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CEMIPQ8WUJ3 1361 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 F5H6K3 240 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 INO80B-WBP1J3KQ70 363 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 NDUFS2O75306 463 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 EGFRP00533 1210 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KRT5P13647 590 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 TXKP42681 527 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 JAK3P52333 1124 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PLCB3Q01970 1234 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KLRC3Q07444 240 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 BIRC3Q13489 604 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 UBE3CQ15386 1083 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms