RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 RSPH10BP0C881 870 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 GCFC2P16383 781 aaKnown RBP22.52■■□□□ 1.2
SFXN1-209ENST00000508290 THPOP40225 353 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 ZNF200P98182 395 aaPredicted RBP22.52■■□□□ 1.2
SFXN1-209ENST00000508290 TRIM29Q14134 588 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 HIC1Q14526 733 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 RABEP1Q15276 862 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 GRIK4Q16099 956 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 CNKSR3Q6P9H4 555 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 NSUN7Q8NE18 718 aaKnown RBP22.52■■□□□ 1.2
SFXN1-209ENST00000508290 VWCEQ96DN2 955 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 SLC9A7Q96T83 725 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 TUBE1Q9UJT0 475 aa22.52■■□□□ 1.2
SFXN1-209ENST00000508290 MBLAC1A4D2B0 266 aaPredicted RBP22.51■■□□□ 1.19
SFXN1-209ENST00000508290 BACH1O14867 736 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 CCNE2O96020 404 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 PSAPP07602 524 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 SFNP31947 248 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 ZNF618Q5T7W0 954 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 MBOAT7Q96N66 472 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 PCYT2Q99447 389 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 KCNJ14Q9UNX9 436 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 TRPC6Q9Y210 931 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 PCDHA10Q9Y5I2 948 aa22.51■■□□□ 1.19
SFXN1-209ENST00000508290 ZBBXA8MT70 800 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 WDR64B1ANS9 1081 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 LARGE1O95461 756 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 FDPSP14324 419 aaKnown RBP22.5■■□□□ 1.19
SFXN1-209ENST00000508290 DNAJB2P25686 324 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 MARK3P27448 753 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 PPP4R3AQ6IN85 833 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 RDM1Q8NG50 284 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 SLC5A5Q92911 643 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 KIF2CQ99661 725 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 ZNF302Q9NR11 478 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 MTMR10Q9NXD2 777 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 CXXC1Q9P0U4 656 aaPredicted RBP22.5■■□□□ 1.19
SFXN1-209ENST00000508290 MSRAQ9UJ68 235 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 COL1A2P08123 1366 aa22.5■■□□□ 1.19
SFXN1-209ENST00000508290 DOCK5Q9H7D0 1870 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 ABHD14A-ACY1A0A1B0GW23 586 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 POTEB3A0JP26 581 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 DDX39AO00148 427 aaKnown RBP22.49■■□□□ 1.19
SFXN1-209ENST00000508290 MSH4O15457 936 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 ST18O60284 1047 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 HBP1O60381 514 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 GAS7O60861 476 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 ATP2A2P16615 1042 aaKnown RBP22.49■■□□□ 1.19
SFXN1-209ENST00000508290 KRT2P35908 639 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 JAK3P52333 1124 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 HMGN5P82970 282 aaKnown RBP22.49■■□□□ 1.19
SFXN1-209ENST00000508290 FAM26DQ5JW98 314 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 TRAF7Q6Q0C0 670 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 POTEBQ6S5H4 581 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 FAM43BQ6ZT52 329 aaPredicted RBP22.49■■□□□ 1.19
SFXN1-209ENST00000508290 NEK8Q86SG6 692 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 ATP8B4Q8TF62 1192 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 WNT8BQ93098 351 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 TEKT3Q9BXF9 490 aa22.49■■□□□ 1.19
SFXN1-209ENST00000508290 SZT2Q5T011 3432 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 NBNO60934 754 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 INSRRP14616 1297 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 KCNJ6P48051 423 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 IKBKEQ14164 716 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 PLCB4Q15147 1175 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 LRCH2Q5VUJ6 765 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 PDXDC2PQ6P474 469 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 TIFAQ96CG3 184 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 FAM167AQ96KS9 214 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 DDX25Q9UHL0 483 aaKnown RBP22.48■■□□□ 1.19
SFXN1-209ENST00000508290 CEP131Q9UPN4 1083 aa22.48■■□□□ 1.19
SFXN1-209ENST00000508290 MAFBQ9Y5Q3 323 aaPredicted RBP22.48■■□□□ 1.19
SFXN1-209ENST00000508290 EDIL3O43854 480 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 INF2Q27J81 1249 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 ZNF484Q5JVG2 852 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 CCDC60Q8IWA6 550 aaPredicted RBP22.47■■□□□ 1.19
SFXN1-209ENST00000508290 BBXQ8WY36 941 aaPredicted RBP22.47■■□□□ 1.19
SFXN1-209ENST00000508290 FAM20AQ96MK3 541 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 PBX4Q9BYU1 374 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 SAMM50Q9Y512 469 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 PCDHA11Q9Y5I1 949 aa22.47■■□□□ 1.19
SFXN1-209ENST00000508290 TBX3O15119 743 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 TDP2O95551 362 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 MMP1P03956 469 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 GPNMBQ14956 572 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 SAFBQ15424 915 aaKnown RBP eCLIP22.46■■□□□ 1.19
SFXN1-209ENST00000508290 MARCH8Q5T0T0 291 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 SWSAP1Q6NVH7 229 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 Q7L0L9 218 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 APBB2Q92870 758 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 SEMA6BQ9H3T3 888 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 STXBP5LQ9Y2K9 1186 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 PCDHA2Q9Y5H9 948 aa22.46■■□□□ 1.19
SFXN1-209ENST00000508290 KIF28PB7ZC32 967 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 MCM2P49736 904 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 MBTPS1Q14703 1052 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 LETM2Q2VYF4 491 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 PLEKHG4Q58EX7 1191 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 IER5Q5VY09 327 aa22.45■■□□□ 1.18
SFXN1-209ENST00000508290 PIK3AP1Q6ZUJ8 805 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms