RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RSPH10BP0C881 870 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
DDX41-209ENST00000508279 KCNJ6P48051 423 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 NONOQ15233 471 aaKnown RBP eCLIP10.64□□□□□ -0.71
DDX41-209ENST00000508279 INF2Q27J81 1249 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 TRIM71Q2Q1W2 868 aaKnown RBP10.64□□□□□ -0.71
DDX41-209ENST00000508279 FAM160B1Q5W0V3 765 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 SWSAP1Q6NVH7 229 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 MIS18BP1Q6P0N0 1132 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 RUFY4Q6ZNE9 571 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CKAP2LQ8IYA6 745 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 TRAPPC12Q8WVT3 735 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 WASF1Q92558 559 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 GJA10Q969M2 543 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 PHF20Q9BVI0 1012 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 FAM49AQ9H0Q0 323 aaPredicted RBP10.64□□□□□ -0.71
DDX41-209ENST00000508279 NKX2-4Q9H2Z4 354 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 SEMA6BQ9H3T3 888 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 TUBE1Q9UJT0 475 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 MICAL3Q7RTP6 2002 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 EMSYQ7Z589 1322 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 MSH4O15457 936 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 GAS7O60861 476 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 LGR5O75473 907 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 TDP2O95551 362 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 INSRRP14616 1297 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 MYOGP15173 224 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 CIITAP33076 1130 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 USP11P51784 963 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 TRIM29Q14134 588 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 NPY5RQ15761 445 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 PDXDC2PQ6P474 469 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 CNKSR3Q6P9H4 555 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 PIK3AP1Q6ZUJ8 805 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 CCDC60Q8IWA6 550 aaPredicted RBP10.63□□□□□ -0.71
DDX41-209ENST00000508279 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 NSUN7Q8NE18 718 aaKnown RBP10.63□□□□□ -0.71
DDX41-209ENST00000508279 OXER1Q8TDS5 423 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 DNAJB3Q8WWF6 145 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 IL17RAQ96F46 866 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
DDX41-209ENST00000508279 UPF2Q9HAU5 1272 aaKnown RBP10.63□□□□□ -0.71
DDX41-209ENST00000508279 ZNF302Q9NR11 478 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 TBC1D22BQ9NU19 505 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 SIP14410 1827 aa10.63□□□□□ -0.71
DDX41-209ENST00000508279 M0R2N6 131 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 DHX15O43143 795 aaKnown RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 EDIL3O43854 480 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 MARCH6O60337 910 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 PARNO95453 639 aaKnown RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 PSAPP07602 524 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 FDPSP14324 419 aaKnown RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 HOXC8P31273 242 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 KRT2P35908 639 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 KRT76Q01546 638 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 GUCY1B3Q02153 619 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 RBL2Q08999 1139 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TMEM62Q0P6H9 643 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 GPNMBQ14956 572 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 RAB30Q15771 203 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TCTN1Q2MV58 587 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 LRCH2Q5VUJ6 765 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 ABHD15Q6UXT9 468 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 PLPPR4Q7Z2D5 763 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TMCO2Q7Z6W1 182 aaPredicted RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 RSPH3Q86UC2 560 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 MYLIPQ8WY64 445 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TNPO1Q92973 898 aaKnown RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 LENG9Q96B70 501 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 TEKT3Q9BXF9 490 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 ZNF576Q9H609 170 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 SLC28A3Q9HAS3 691 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
DDX41-209ENST00000508279 YBX2Q9Y2T7 364 aaKnown RBP10.62□□□□□ -0.71
DDX41-209ENST00000508279 RRN3P2A6NIE6 340 aa10.61□□□□□ -0.71
DDX41-209ENST00000508279 CCNT1O60563 726 aaKnown RBP10.61□□□□□ -0.71
DDX41-209ENST00000508279 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
DDX41-209ENST00000508279 ATG7O95352 703 aa10.61□□□□□ -0.71
DDX41-209ENST00000508279 WDR5P61964 334 aaKnown RBP10.61□□□□□ -0.71
DDX41-209ENST00000508279 ADAM17P78536 824 aa10.61□□□□□ -0.71
DDX41-209ENST00000508279 DEFB103AP81534 67 aa10.61□□□□□ -0.71
DDX41-209ENST00000508279 ST3GAL1Q11201 340 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms