RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 SLC12A3P55017 1021 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 PABPC4Q13310 644 aaKnown RBP eCLIP23.59■■□□□ 1.371e-8■■■■□ 20.2
TSPAN17-207ENST00000508164 GPATCH4Q5T3I0 446 aaKnown RBP23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 KCNMB3Q9NPA1 279 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 LUC7LQ9NQ29 371 aaKnown RBP23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 CETN3O15182 167 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 GYS1P13807 737 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 ARHGAP27Q6ZUM4 889 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 ZNF571Q7Z3V5 609 aaPredicted RBP23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 CATSPER3Q86XQ3 398 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 ANO3Q9BYT9 981 aa23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 DHX36Q9H2U1 1008 aaKnown RBP23.59■■□□□ 1.37
TSPAN17-207ENST00000508164 MYH4Q9Y623 1939 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 EIF3HO15372 352 aaKnown RBP eCLIP23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 BBOX1O75936 387 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 PDCLQ13371 301 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 ZNF233A6NK53 670 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 RAD51CO43502 376 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 NNTQ13423 1086 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 PRR16Q569H4 304 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 PACS2Q86VP3 889 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 RNF14Q9UBS8 474 aa23.58■■□□□ 1.37
TSPAN17-207ENST00000508164 KCNK3O14649 394 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 EPB41P11171 864 aaKnown RBP23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 HOXD13P35453 343 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 CACNB3P54284 484 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 DOK7Q18PE1 504 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 IRF2BP2Q7Z5L9 587 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 PIK3R5Q8WYR1 880 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 SAMM50Q9Y512 469 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 MYBP10242 640 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 HOXA7P31268 230 aaPredicted RBP23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 DCAF17Q5H9S7 520 aaPredicted RBP23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 CFAP58Q5T655 872 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 DPY19L2P1Q6NXN4 242 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 CDC42EP5Q6NZY7 148 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 SFR1Q86XK3 245 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 IQCKQ8N0W5 287 aa23.57■■□□□ 1.36
TSPAN17-207ENST00000508164 FAM170AA1A519 330 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 PAK2Q13177 524 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 GIT2Q14161 759 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 SPAG5Q96R06 1193 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 SWAP70Q9UH65 585 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 AJAP1Q9UKB5 411 aaPredicted RBP23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 ADAMTSL1Q8N6G6 1762 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 FRMD3A2A2Y4 597 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 RSPH10B2B2RC85 870 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 RSPH10BP0C881 870 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 UCHL3P15374 230 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 NOP2P46087 812 aaKnown RBP23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 PPARDQ03181 441 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 ZC3H3Q8IXZ2 948 aaKnown RBP23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 USP38Q8NB14 1042 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 REEP2Q9BRK0 252 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 PCDHAC2Q9Y5I4 1007 aa23.56■■□□□ 1.36
TSPAN17-207ENST00000508164 MEIS2O14770 477 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 CDC37Q16543 378 aaPredicted RBP23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 DNAJC18Q9H819 358 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 CYP4A11Q02928 519 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 SPIRE1Q08AE8 756 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 TCP10Q12799 353 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 EDRF1Q3B7T1 1238 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 TCERG1LQ5VWI1 586 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 GBP6Q6ZN66 633 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 IKZF4Q9H2S9 585 aa23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 ARMCX3Q9UH62 379 aaPredicted RBP23.55■■□□□ 1.36
TSPAN17-207ENST00000508164 EEF2P13639 858 aaKnown RBP23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 PON1P27169 355 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 CASP4P49662 377 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 KCNA1Q09470 495 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 GJB7Q6PEY0 223 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 AKAP3O75969 853 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 SPATA31C1P0DKV0 1188 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 USP11P51784 963 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 ARHGAP4P98171 946 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 RPS6KA1Q15418 735 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 SLC30A10Q6XR72 485 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 AP1M1Q9BXS5 423 aa23.54■■□□□ 1.36
TSPAN17-207ENST00000508164 EBAG9O00559 213 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 CLIC2O15247 247 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 ZEB2O60315 1214 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 DDR1Q08345 913 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 EXOC3L4Q17RC7 722 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 KNOP1Q1ED39 458 aaKnown RBP23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 USH1GQ495M9 461 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 ETNPPLQ8TBG4 499 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 TAF4BQ92750 862 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 CEP104O60308 925 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 AFPP02771 609 aaKnown RBP23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 SKOR1P84550 965 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 DDX42Q86XP3 938 aaKnown RBP eCLIP23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 RNPC3Q96LT9 517 aaKnown RBP23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 NAGPAQ9UK23 515 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 FAM169AQ9Y6X4 670 aa23.53■■□□□ 1.36
TSPAN17-207ENST00000508164 SFI1A8K8P3 1242 aa23.52■■□□□ 1.36
TSPAN17-207ENST00000508164 KIF4AO95239 1232 aa23.52■■□□□ 1.36
TSPAN17-207ENST00000508164 HLA-DOAP06340 250 aa23.52■■□□□ 1.36
TSPAN17-207ENST00000508164 APOBEC3HQ6NTF7 200 aaKnown RBP23.52■■□□□ 1.36
TSPAN17-207ENST00000508164 PITPNM2Q9BZ72 1349 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms