RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 HOXD8P13378 290 aaPredicted RBP25.23■■□□□ 1.63
SNCB-204ENST00000508006 BEX3Q00994 111 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 DGKDQ16760 1214 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 TJAP1Q5JTD0 557 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 LRCH2Q5VUJ6 765 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 ZNF746Q6NUN9 644 aaPredicted RBP25.23■■□□□ 1.63
SNCB-204ENST00000508006 PSRC1Q6PGN9 363 aaPredicted RBP25.23■■□□□ 1.63
SNCB-204ENST00000508006 ZNF365Q70YC5 407 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 POTEDQ86YR6 584 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 MTMR9Q96QG7 549 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 TEKT3Q9BXF9 490 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 PBX4Q9BYU1 374 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 POLR3EQ9NVU0 708 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 CIZ1Q9ULV3 898 aaPredicted RBP25.23■■□□□ 1.63
SNCB-204ENST00000508006 PCDHB6Q9Y5E3 794 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 NOP56O00567 594 aaKnown RBP25.22■■□□□ 1.63
SNCB-204ENST00000508006 MARCH6O60337 910 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 GAS7O60861 476 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 PBX2P40425 430 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 ZNF174Q15697 407 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 HSDL1Q3SXM5 330 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 ATL3Q6DD88 541 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 FAM126BQ8IXS8 530 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 SMAP1Q8IYB5 467 aaPredicted RBP25.22■■□□□ 1.63
SNCB-204ENST00000508006 USP38Q8NB14 1042 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 AFG1LQ8WV93 481 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 HAS1Q92839 578 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 IPO9Q96P70 1041 aaKnown RBP25.22■■□□□ 1.63
SNCB-204ENST00000508006 MTIF3Q9H2K0 278 aaKnown RBP25.22■■□□□ 1.63
SNCB-204ENST00000508006 PKD2L1Q9P0L9 805 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 MSRAQ9UJ68 235 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 CEP131Q9UPN4 1083 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 ATP6V1DQ9Y5K8 247 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 MYO9BQ13459 2157 aa25.22■■□□□ 1.63
SNCB-204ENST00000508006 CABYRO75952 493 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 MMP3P08254 477 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 SFNP31947 248 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 PRPHP41219 470 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 PKP1Q13835 747 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 RDM1Q8NG50 284 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 SEPT1Q8WYJ6 367 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 GPR20Q99678 358 aa25.21■■□□□ 1.63
SNCB-204ENST00000508006 ATG7O95352 703 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 FGBP02675 491 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 CYP2C18P33260 490 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 C4orf32Q8N8J7 132 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 ZNF396Q96N95 335 aaPredicted RBP25.2■■□□□ 1.62
SNCB-204ENST00000508006 PRDM12Q9H4Q4 367 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 BCAS3Q9H6U6 928 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 IL23AQ9NPF7 189 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 PCDHA12Q9UN75 941 aa25.2■■□□□ 1.62
SNCB-204ENST00000508006 OR52Z1P0C646 297 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 PTGDRQ13258 359 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 PPP2R5CQ13362 524 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 RAB30Q15771 203 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 B3GNT9Q6UX72 402 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 CXCL17Q6UXB2 119 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 ZDHHC9Q9Y397 364 aa25.19■■□□□ 1.62
SNCB-204ENST00000508006 MORC2Q9Y6X9 1032 aaPredicted RBP25.19■■□□□ 1.62
SNCB-204ENST00000508006 PTGS1P23219 599 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 JAK3P52333 1124 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 ACTR2P61160 394 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 ATP2C1P98194 919 aaPredicted RBP25.18■■□□□ 1.62
SNCB-204ENST00000508006 ITGA7Q13683 1181 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 NBR1Q14596 966 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 RASIP1Q5U651 963 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 ARL6IP4Q66PJ3 421 aaKnown RBP25.18■■□□□ 1.62
SNCB-204ENST00000508006 SEZ6LQ9BYH1 1024 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 TMEM60Q9H2L4 133 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 HIPK3Q9H422 1215 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 TTC12Q9H892 705 aaPredicted RBP25.18■■□□□ 1.62
SNCB-204ENST00000508006 WDR81Q562E7 1941 aa25.18■■□□□ 1.62
SNCB-204ENST00000508006 GSTTP1A0A1W2PQM5 241 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 WDR64B1ANS9 1081 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 CD4P01730 458 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 IGFBP4P22692 258 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 PURAQ00577 322 aaKnown RBP25.17■■□□□ 1.62
SNCB-204ENST00000508006 SLC28A3Q9HAS3 691 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 VAV3Q9UKW4 847 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 PCDHA10Q9Y5I2 948 aa25.17■■□□□ 1.62
SNCB-204ENST00000508006 SPTBN5Q9NRC6 3674 aaKnown RBP25.17■■□□□ 1.62
SNCB-204ENST00000508006 EMSYQ7Z589 1322 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 TNFRSF10AO00220 468 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 CCNE2O96020 404 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 TCF7P36402 384 aaPredicted RBP25.16■■□□□ 1.62
SNCB-204ENST00000508006 TXKP42681 527 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 TMEM266Q2M3C6 531 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 MIS18BP1Q6P0N0 1132 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 ABHD15Q6UXT9 468 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 HERVK_113Q902F9 699 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 MTG1Q9BT17 334 aaPredicted RBP25.16■■□□□ 1.62
SNCB-204ENST00000508006 KATNAL1Q9BW62 490 aa25.16■■□□□ 1.62
SNCB-204ENST00000508006 IGKV6D-21A0A0A0MT36 114 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 DDX39AO00148 427 aaKnown RBP25.15■■□□□ 1.62
SNCB-204ENST00000508006 SORBS3O60504 671 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 PSAPP07602 524 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 FXR2P51116 673 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNCB-204ENST00000508006 CCL23P55773 120 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 PDIA5Q14554 519 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 SF3A1Q15459 793 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms