RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 KIAA1211Q6ZU35 1233 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 DPP9Q86TI2 863 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 ERC1Q8IUD2 1116 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 SIAH1Q8IUQ4 282 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 FAM20CQ8IXL6 584 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 CRNKL1Q9BZJ0 848 aaKnown RBP6.68□□□□□ -1.34
ATXN3-210ENST00000507965 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
ATXN3-210ENST00000507965 PRDM5Q9NQX1 630 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-210ENST00000507965 PATL2C9JE40 543 aaKnown RBP6.67□□□□□ -1.34
ATXN3-210ENST00000507965 KBTBD13C9JR72 458 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 FSCN2O14926 492 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 MSCO60682 206 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 FLOT1O75955 427 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 PGK2P07205 417 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 BMP3P12645 472 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 COG2Q14746 738 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 SNX17Q15036 470 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 TTF1Q15361 905 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-210ENST00000507965 SHHQ15465 462 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 OLFML2BQ68BL8 750 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 BEND4Q6ZU67 534 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 TMEM179Q6ZVK1 233 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 SIRT2Q8IXJ6 389 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 SHCBP1Q8NEM2 672 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 OR13H1Q8NG92 308 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 FERMT2Q96AC1 680 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 MAML3Q96JK9 1138 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 LBHD1Q9BQE6 289 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-210ENST00000507965 PDLIM7Q9NR12 457 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 FBXO28Q9NVF7 368 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 ROBO3Q96MS0 1386 aa6.67□□□□□ -1.34
ATXN3-210ENST00000507965 TANC1Q9C0D5 1861 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 COL4A4P53420 1690 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-210ENST00000507965 TRIM43BA6NCK2 446 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 WDR64B1ANS9 1081 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 SEPT4O43236 478 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 ATG7O95352 703 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 BRD1O95696 1058 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 ITGB8P26012 769 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 ADD2P35612 726 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 ADCYAP1R1P41586 468 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 LRRC41Q15345 812 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 COX20Q5RI15 118 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 SLC39A5Q6ZMH5 540 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATXN3-210ENST00000507965 CLASRPQ8N2M8 674 aaKnown RBP6.66□□□□□ -1.34
ATXN3-210ENST00000507965 BADQ92934 168 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 TRIM43Q96BQ3 446 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-210ENST00000507965 BOLA2Q9H3K6 86 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 PAG1Q9NWQ8 432 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 ZBED9Q6R2W3 1325 aa6.66□□□□□ -1.34
ATXN3-210ENST00000507965 WDR46O15213 610 aaKnown RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 DDX3YO15523 660 aaKnown RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 STRNO43815 780 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 PGK1P00558 417 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 IFIT2P09913 472 aaKnown RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 EEF2P13639 858 aaKnown RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 SCNN1AP37088 669 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 CDK8P49336 464 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 EPHB4P54760 987 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 KCNA1Q09470 495 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 TRIP4Q15650 581 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 FAM83BQ5T0W9 1011 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 C12orf60Q5U649 245 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 TTC39BQ5VTQ0 682 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 FAM109BQ6ICB4 259 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 TMED8Q6PL24 325 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 C16orf86Q6ZW13 317 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 MB21D1Q8N884 522 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 REPS2Q8NFH8 660 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 GIMAP7Q8NHV1 300 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 UBASH3BQ8TF42 649 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 KIF1BPQ96EK5 621 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 MMP19Q99542 508 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 CDX2Q99626 313 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 TTYH1Q9H313 450 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 MROH8Q9H579 483 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 XPNPEP3Q9NQH7 507 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 HOXC10Q9NYD6 342 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 ZNF214Q9UL59 606 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-210ENST00000507965 PTPRSQ13332 1948 aa6.65□□□□□ -1.34
ATXN3-210ENST00000507965 SYNRGQ9UMZ2 1314 aa6.65□□□□□ -1.35
ATXN3-210ENST00000507965 LAMA2P24043 3122 aaKnown RBP6.65□□□□□ -1.35
ATXN3-210ENST00000507965 LAMA4Q16363 1823 aa6.64□□□□□ -1.35
ATXN3-210ENST00000507965 SCN5AQ14524 2016 aa6.64□□□□□ -1.35
ATXN3-210ENST00000507965 A0A1W2PQ45 241 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-210ENST00000507965 A0A1W2PQY0 241 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms