RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 ORAI2Q96SN7 254 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 CCM2LQ9NUG4 571 aaPredicted RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 WASHC2AQ641Q2 1341 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 PLEKHD1A6NEE1 506 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 SGSM2O43147 1006 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 XPOTO43592 962 aaKnown RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 HYAL3O43820 417 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 KDM1AO60341 852 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 BUB1BO60566 1050 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 MED26O95402 600 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 KRT18P05783 430 aaKnown RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 CLEC2LP0C7M8 214 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 PDE6BP35913 854 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 KIR2DL1P43626 348 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 KIR2DL2P43627 348 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 EPHA5P54756 1037 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 ERVFC1P60507 584 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 TUSC3Q13454 348 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 GFOD2Q3B7J2 385 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 MROH9Q5TGP6 573 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 CYB5RLQ6IPT4 315 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 CC2D1AQ6P1N0 951 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 KCTD1Q719H9 257 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 KRTAP1-3Q8IUG1 177 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 CCAR1Q8IX12 1150 aaKnown RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 SCYL1Q96KG9 808 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 TEKT5Q96M29 485 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 SLC2A13Q96QE2 648 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 RPS6KC1Q96S38 1066 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 ANO3Q9BYT9 981 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 PCIF1Q9H4Z3 704 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 PDLIM7Q9NR12 457 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 KCNH7Q9NS40 1196 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 ACSL6Q9UKU0 697 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 COA3Q9Y2R0 106 aaPredicted RBP5.27□□□□□ -1.57
USP53-204ENST00000507906 GIT1Q9Y2X7 761 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
USP53-204ENST00000507906 KLHL33A6NCF5 533 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 ELL2O00472 640 aaPredicted RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 GSC2O15499 205 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 PSPNO60542 156 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 CFBP00751 764 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 ASGR2P07307 311 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 GLI4P10075 376 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 PRKCAP17252 672 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 PTPN1P18031 435 aaKnown RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 TRHRP34981 398 aaPredicted RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 HK2P52789 917 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 KRT85P78386 507 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 SRSF2Q01130 221 aaKnown RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 GRIN1Q05586 938 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 ZP2Q05996 745 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 LRP8Q14114 963 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 ACAP2Q15057 778 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 CLUL1Q15846 466 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 CT83Q5H943 113 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 B3GNT9Q6UX72 402 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 FRMD7Q6ZUT3 714 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 LYSMD2Q8IV50 215 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 EXOC8Q8IYI6 725 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 EAF2Q96CJ1 260 aaPredicted RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 CLIP3Q96DZ5 547 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 C19orf44Q9H6X5 657 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 ACSS2Q9NR19 701 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 C19orf73Q9NVV2 129 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 LMCD1Q9NZU5 365 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 MSRAQ9UJ68 235 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
USP53-204ENST00000507906 EDARQ9UNE0 448 aa5.26□□□□□ -1.57
USP53-204ENST00000507906 A6NNZ2 444 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 IL33O95760 270 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 MYL1P05976 194 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 MMEP08473 750 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
USP53-204ENST00000507906 MYBP10242 640 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 C5AR1P21730 350 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 MTNR1BP49286 362 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 CORO7P57737 925 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 BIRC2Q13490 618 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 ZNF267Q14586 743 aaPredicted RBP5.25□□□□□ -1.57
USP53-204ENST00000507906 TOR2AQ5JU69 321 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 ZBTB41Q5SVQ8 909 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 BTBD8Q5XKL5 378 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 KCNK18Q7Z418 384 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.25□□□□□ -1.57
USP53-204ENST00000507906 CXorf67Q86X51 503 aaPredicted RBP5.25□□□□□ -1.57
USP53-204ENST00000507906 ARRDC4Q8NCT1 418 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 NUP43Q8NFH3 380 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 RUNDC1Q96C34 613 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 SHISA4Q96DD7 197 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 ALPK1Q96QP1 1244 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 ZNF277Q9NRM2 450 aaPredicted RBP5.25□□□□□ -1.57
USP53-204ENST00000507906 DNAJC28Q9NX36 388 aa5.25□□□□□ -1.57
USP53-204ENST00000507906 ASH2LQ9UBL3 628 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms