RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RUFY4Q6ZNE9 571 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 NSUN6Q8TEA1 469 aaKnown RBP8.49□□□□□ -1.05
VCAN-207ENST00000507162 ATRIPQ8WXE1 791 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 BOLA2Q9H3K6 86 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 TUT1Q9H6E5 874 aaKnown RBP8.49□□□□□ -1.05
VCAN-207ENST00000507162 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 TBC1D17Q9HA65 648 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 ENTPD7Q9NQZ7 604 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
VCAN-207ENST00000507162 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 SIT1Q9Y3P8 196 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 SUPT16HQ9Y5B9 1047 aaKnown RBP8.49□□□□□ -1.05
VCAN-207ENST00000507162 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 DSPP15924 2871 aaKnown RBP8.49□□□□□ -1.05
VCAN-207ENST00000507162 TTC3P53804 2025 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 LCTP09848 1927 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 KRBA1A5PL33 1030 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 SPDYE4A6NLX3 237 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 FSCN2O14926 492 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 NARSO43776 548 aaKnown RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 TDO2P48775 406 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 ARHGAP4P98171 946 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 UBE3CQ15386 1083 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 HSDL1Q3SXM5 330 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 USH1GQ495M9 461 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 ARHGEF16Q5VV41 709 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 TMC7Q7Z402 723 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 RTN4RL1Q86UN2 441 aaPredicted RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 STRBPQ96SI9 672 aaKnown RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 RMDN3Q96TC7 470 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 TCF25Q9BQ70 676 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 C16orf70Q9BSU1 422 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 EHMT1Q9H9B1 1298 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 MLXIPQ9HAP2 919 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 KCNK12Q9HB15 430 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 DUSP12Q9UNI6 340 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 TNNQ9UQP3 1299 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 EXOC6BQ9Y2D4 811 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 ASPMQ8IZT6 3477 aa8.48□□□□□ -1.05
VCAN-207ENST00000507162 FRMPD2Q68DX3 1309 aaPredicted RBP8.48□□□□□ -1.05
VCAN-207ENST00000507162 IGF2RP11717 2491 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 TBKBP1A7MCY6 615 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 NMT2O60551 498 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 EIF3JO75822 258 aaKnown RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 GGPS1O95749 300 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 EOMESO95936 686 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 PROS1P07225 676 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 EIF2AK2P19525 551 aaKnown RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 CD52P31358 61 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 SLFN5Q08AF3 891 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 XRRA1Q6P2D8 792 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 RASGRP4Q8TDF6 673 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 LINC01599Q8WXQ3 324 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 IWS1Q96ST2 819 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 TYW1Q9NV66 732 aaKnown RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 WNT16Q9UBV4 365 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 ZMIZ1Q9ULJ6 1067 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 USTQ9Y2C2 406 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 PCDHB7Q9Y5E2 793 aa8.47□□□□□ -1.05
VCAN-207ENST00000507162 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.47□□□□□ -1.05
VCAN-207ENST00000507162 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.05
VCAN-207ENST00000507162 NBEAQ8NFP9 2946 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 SLC30A4O14863 429 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 LGALS2P05162 132 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 NR3C2P08235 984 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 IFIT2P09913 472 aaKnown RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 MYCLP12524 364 aaPredicted RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 SCG2P13521 617 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 CSTF1Q05048 431 aaKnown RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 SPEM2Q0P670 501 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 PPP4R3BQ5MIZ7 849 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 N4BP2L1Q5TBK1 243 aaPredicted RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 LRSAM1Q6UWE0 723 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 TMC5Q6UXY8 1006 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 OTOP3Q7RTS5 596 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 RSPH3Q86UC2 560 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 ERC1Q8IUD2 1116 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 COLGALT1Q8NBJ5 622 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 SYTL5Q8TDW5 730 aaPredicted RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 RSAD2Q8WXG1 361 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 MRPS27Q92552 414 aaKnown RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 ARHGAP45Q92619 1136 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms