RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PTGISQ16647 500 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 SWSAP1Q6NVH7 229 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 PLPPR4Q7Z2D5 763 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 TET1Q8NFU7 2136 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 AFAP1L1Q8TED9 768 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 NOC4LQ9BVI4 516 aaKnown RBP20.52■□□□□ 0.88
NPHP4-210ENST00000506941 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 AZI2Q9H6S1 392 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 DISC1Q9NRI5 854 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 TCEAL9Q9UHQ7 104 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 PCDHA10Q9Y5I2 948 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 UMODL1Q5DID0 1318 aa20.52■□□□□ 0.87
NPHP4-210ENST00000506941 BACH1O14867 736 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 PSAPP07602 524 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 SYT1P21579 422 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 TRAPPC10P48553 1259 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 MDM2Q00987 491 aaPredicted RBP20.51■□□□□ 0.87
NPHP4-210ENST00000506941 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 PLCB4Q15147 1175 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 ZNF174Q15697 407 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 CALCRLQ16602 461 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 TTC38Q5R3I4 469 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 DHX38Q92620 1227 aaKnown RBP20.51■□□□□ 0.87
NPHP4-210ENST00000506941 MTMR9Q96QG7 549 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 PPP1R12CQ9BZL4 782 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 ZNF302Q9NR11 478 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 SETD4Q9NVD3 440 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 IGSF9BQ9UPX0 1349 aa20.51■□□□□ 0.87
NPHP4-210ENST00000506941 C17orf102A2RUQ5 167 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 VPS37CA5D8V6 355 aaPredicted RBP20.5■□□□□ 0.87
NPHP4-210ENST00000506941 EML1O00423 815 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 TIMP1P01033 207 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 RAG1P15918 1043 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 ATP4AP20648 1035 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 PDCP20941 246 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 SFNP31947 248 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 JAK3P52333 1124 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 ADAM17P78536 824 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 SPIRE1Q08AE8 756 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 UGCGQ16739 394 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 FAM160B1Q5W0V3 765 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 MIER3Q7Z3K6 550 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 LMBR1Q8WVP7 490 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 BADQ92934 168 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 WNT8BQ93098 351 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 GDF15Q99988 308 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 HIPK3Q9H422 1215 aa20.5■□□□□ 0.87
NPHP4-210ENST00000506941 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
NPHP4-210ENST00000506941 MAFBQ9Y5Q3 323 aaPredicted RBP20.5■□□□□ 0.87
NPHP4-210ENST00000506941 CYP2C18P33260 490 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 PDXDC2PQ6P474 469 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 SLFN12Q8IYM2 578 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 RDM1Q8NG50 284 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 PRO3102Q9H379 93 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 GABBR1Q9UBS5 961 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 PCDHB6Q9Y5E3 794 aa20.49■□□□□ 0.87
NPHP4-210ENST00000506941 TREHO43280 583 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 ZNF862O60290 1169 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 MARCH6O60337 910 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 BAG4O95429 457 aaKnown RBP20.48■□□□□ 0.87
NPHP4-210ENST00000506941 SLC26A2P50443 739 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 PPFIA1Q13136 1202 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 ORC2Q13416 577 aaPredicted RBP20.48■□□□□ 0.87
NPHP4-210ENST00000506941 GRIK4Q16099 956 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 CHRDL2Q6WN34 429 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 FERMT3Q86UX7 667 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 ATP6V0A1Q93050 837 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 WNT8AQ9H1J5 351 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
NPHP4-210ENST00000506941 POTEB3A0JP26 581 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 INSRRP14616 1297 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 PTK7Q13308 1070 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 TRIM71Q2Q1W2 868 aaKnown RBP20.47■□□□□ 0.87
NPHP4-210ENST00000506941 MARCH8Q5T0T0 291 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 POTEBQ6S5H4 581 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 SERINC5Q86VE9 423 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 ATP8B4Q8TF62 1192 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 TRAPPC12Q8WVT3 735 aa20.47■□□□□ 0.87
NPHP4-210ENST00000506941 LBHD1Q9BQE6 289 aaPredicted RBP20.47■□□□□ 0.87
NPHP4-210ENST00000506941 ZBTB42B2RXF5 422 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 TXKP42681 527 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 NCAPH2Q6IBW4 605 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 MFSD5Q6N075 450 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 ZBTB10Q96DT7 871 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 TTC12Q9H892 705 aaPredicted RBP20.46■□□□□ 0.87
NPHP4-210ENST00000506941 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 LAMA3Q16787 3333 aa20.46■□□□□ 0.87
NPHP4-210ENST00000506941 MBLAC1A4D2B0 266 aaPredicted RBP20.45■□□□□ 0.86
NPHP4-210ENST00000506941 RBAK-RBAKDNI3L0D1 243 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 HSP90AA1P07900 732 aaKnown RBP20.45■□□□□ 0.86
NPHP4-210ENST00000506941 OR52Z1P0C646 297 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms