RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PLS1Q14651 629 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 UBIAD1Q9Y5Z9 338 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 UGCGQ16739 394 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 ZC2HC1CQ53FD0 456 aaPredicted RBP13.51□□□□□ -0.25
LIN54-206ENST00000506560 C1orf186Q6ZWK4 172 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
LIN54-206ENST00000506560 PDCD2LQ9BRP1 358 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 TEKT3Q9BXF9 490 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
LIN54-206ENST00000506560 FAM207AQ9NSI2 230 aaPredicted RBP13.51□□□□□ -0.25
LIN54-206ENST00000506560 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 TRIM21P19474 475 aaKnown RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 DSG3P32926 999 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 MTMR1Q13613 665 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 CLMNQ96JQ2 1002 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 PXMP2Q9NR77 195 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 SPDYE16A6NNV3 312 aaPredicted RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 FECHP22830 423 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.257e-6■■■■□ 21.3
LIN54-206ENST00000506560 PPP1R2P41236 205 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 SETQ01105 290 aaPredicted RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 GHRHRQ02643 423 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 FSTL1Q12841 308 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 C9orf131Q5VYM1 1079 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 PCNX4Q63HM2 1172 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 SIK3Q9Y2K2 1263 aa13.5□□□□□ -0.25
LIN54-206ENST00000506560 REXO2Q9Y3B8 237 aaKnown RBP13.5□□□□□ -0.25
LIN54-206ENST00000506560 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
LIN54-206ENST00000506560 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 EPM2AIP1Q7L775 607 aaPredicted RBP13.49□□□□□ -0.25
LIN54-206ENST00000506560 MIER3Q7Z3K6 550 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
LIN54-206ENST00000506560 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 LUC7L2Q9Y383 392 aaKnown RBP13.49□□□□□ -0.25
LIN54-206ENST00000506560 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 KIAA1217Q5T5P2 1943 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 CLIC2O15247 247 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 GCNT3O95395 438 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 CCNE2O96020 404 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 FKBP3Q00688 224 aaKnown RBP13.49□□□□□ -0.25
LIN54-206ENST00000506560 COG2Q14746 738 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 EPHA7Q15375 998 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 C12orf42Q96LP6 360 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 TSG101Q99816 390 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 PAXBP1Q9Y5B6 917 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 RGS20O76081 388 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 CASP4P49662 377 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 MAN2A1Q16706 1144 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 CCDC40Q4G0X9 1142 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
LIN54-206ENST00000506560 PTPRFP10586 1907 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 MYH11P35749 1972 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 OTOFQ9HC10 1997 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
LIN54-206ENST00000506560 TPM1P09493 284 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 NR2F2P24468 414 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 ADAM9Q13443 819 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
LIN54-206ENST00000506560 DAW1Q8N136 415 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 MYCT1Q8N699 235 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 OR8K1Q8NGG5 319 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 RIT2Q99578 217 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 MMRN2Q9H8L6 949 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
LIN54-206ENST00000506560 FRMPD4Q14CM0 1322 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 SLC26A4O43511 780 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 CCDC175P0C221 793 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 BCRP11274 1271 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 GNG11P61952 73 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 SP4Q02446 784 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
LIN54-206ENST00000506560 ELP3Q9H9T3 547 aa13.48□□□□□ -0.25
LIN54-206ENST00000506560 ADARB2Q9NS39 739 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms