RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 VCAM1P19320 739 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 GPC2Q8N158 579 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 BHMT2Q9H2M3 363 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 ZSWIM4Q9H7M6 989 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 PHIPQ8WWQ0 1821 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 SSU72P8A0A1W2PR75 194 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 P4HBP07237 508 aaKnown RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 INPP5BP32019 993 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF131P52739 623 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 UBXN4Q92575 508 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 CDHR1Q96JP9 859 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 NAPGQ99747 312 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 DESI2Q9BSY9 194 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 ABCD1P33897 745 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 KRT76Q01546 638 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ADAM9Q13443 819 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 PTPN21Q16825 1174 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 RINT1Q6NUQ1 792 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ZHX3Q9H4I2 956 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 GTPBP10A4D1E9 387 aaKnown RBP12.49□□□□□ -0.41
NFKB1-205ENST00000505458 WHAMMP3Q1A5X7 153 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 KIAA1328Q86T90 577 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 HPS3Q969F9 1004 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 FBXO28Q9NVF7 368 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ARMCX3Q9UH62 379 aaPredicted RBP12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 SLITRK3O94933 977 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 NR2F2P24468 414 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 DYDC2Q96IM9 177 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
NFKB1-205ENST00000505458 TMOD4Q9NZQ9 345 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
NFKB1-205ENST00000505458 ALAS1P13196 640 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 MTF1Q14872 753 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 LRRC41Q15345 812 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 C1orf186Q6ZWK4 172 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 TMEM174Q8WUU8 243 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 GPRASP2Q96D09 838 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 PLCB1Q9NQ66 1216 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 SCP2P22307 547 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 MTMR2Q13614 643 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 TBC1D10BQ4KMP7 808 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 GJA10Q969M2 543 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 CDC23Q9UJX2 597 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 EML1O00423 815 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 LCA5LO95447 670 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 LMNB1P20700 586 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 CCND2P30279 289 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 AGBL1Q96MI9 1066 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 UNC45AQ9H3U1 944 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 NHEJ1Q9H9Q4 299 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 LZTFL1Q9NQ48 299 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 GPRC5DQ9NZD1 345 aa12.48□□□□□ -0.41
NFKB1-205ENST00000505458 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
NFKB1-205ENST00000505458 VAV2P52735 878 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
NFKB1-205ENST00000505458 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
NFKB1-205ENST00000505458 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
NFKB1-205ENST00000505458 VWA5AO00534 786 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 GCNT3O95395 438 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
NFKB1-205ENST00000505458 MTMR1Q13613 665 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 SLC9C1Q4G0N8 1177 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF569Q5MCW4 686 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms