RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RARBP10826 455 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 EHHADHQ08426 723 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 MGAT3Q09327 533 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 GRB10Q13322 594 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 KCNG4Q8TDN1 519 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 LENG1Q96BZ8 264 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 ZNF396Q96N95 335 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 CAND2O75155 1236 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 MYCLP12524 364 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 ACLYP53396 1101 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 PLCB4Q15147 1175 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 LRCH2Q5VUJ6 765 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 OR6J1Q8NGC5 347 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 PCDHA10Q9Y5I2 948 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A087X0B3 334 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 DGKDQ16760 1214 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 ADALQ6DHV7 355 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 CYFIP1Q7L576 1253 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 ANKEF1Q9NU02 776 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 TSC2P49815 1807 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 KDM3AQ9Y4C1 1321 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLC12A3P55017 1021 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 SEPT14Q6ZU15 432 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 PCSK9Q8NBP7 692 aaKnown RBP9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 ABHD8Q96I13 439 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 STRA6Q9BX79 667 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 TTC12Q9H892 705 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 BLOC1S4Q9NUP1 217 aa9.34□□□□□ -0.91
CDC42SE2-208ENST00000505065 MED24O75448 989 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF174Q15697 407 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 KCNA10Q16322 511 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 GJC2Q5T442 439 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAM126BQ8IXS8 530 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 EIF2AK1Q9BQI3 630 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 MTG1Q9BT17 334 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 CFAP45Q9UL16 551 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ISY1Q9ULR0 285 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 TCF7P36402 384 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 AFG1LQ8WV93 481 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 DHX33Q9H6R0 707 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 GTF2IRD1Q9UHL9 959 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 P4HBP07237 508 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 CMA1P23946 247 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 RTP1P59025 263 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 POU5F1BQ06416 359 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ANO5Q75V66 913 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ARRDC4Q8NCT1 418 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ATP8B4Q8TF62 1192 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 NFKBIZQ9BYH8 718 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 PSAPP07602 524 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 MCM7P33993 719 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF131P52739 623 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 MIS18BP1Q6P0N0 1132 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 GJA10Q969M2 543 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 SCAND2PQ9GZW5 306 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 SMARCAD1Q9H4L7 1026 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 DISC1Q9NRI5 854 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 PCDHA12Q9UN75 941 aa9.33□□□□□ -0.92
CDC42SE2-208ENST00000505065 VPS37CA5D8V6 355 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 C22orf31O95567 290 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 DHX37Q8IY37 1157 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 SPTLC2O15270 562 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 BAG4O95429 457 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 ASGR1P07306 291 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 PSMC5P62195 406 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 SLC39A5Q6ZMH5 540 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF710Q8N1W2 664 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 DHX38Q92620 1227 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 KATNAL1Q9BW62 490 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 KBTBD4Q9NVX7 518 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZHX1Q9UKY1 873 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 GAS7O60861 476 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 PSEN2P49810 448 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 RBM43Q6ZSC3 357 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 RNF180Q86T96 592 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 SERINC5Q86VE9 423 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms