RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RNF208Q9H0X6 261 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 JPH1Q9HDC5 661 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 XPNPEP3Q9NQH7 507 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CHMP5Q9NZZ3 219 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SLC9A2Q9UBY0 812 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PCDHA7Q9UN72 937 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TRPC6Q9Y210 931 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SRPRBQ9Y5M8 271 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ELP1O95163 1332 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LTBP2Q14767 1821 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 DNM1LO00429 736 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ZBTB39O15060 712 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 MED24O75448 989 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LGALS2P05162 132 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ASGR1P07306 291 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 RARBP10826 455 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TCF7P36402 384 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ZNF76P36508 570 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TXKP42681 527 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CDK7P50613 346 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TARBP2Q15633 366 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 KCNA10Q16322 511 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 HYIQ5T013 277 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 MARCH8Q5T0T0 291 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ANO5Q75V66 913 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 KCNK18Q7Z418 384 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CATSPER3Q86XQ3 398 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SMAP1Q8IYB5 467 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 GIMAP8Q8ND71 665 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 RDM1Q8NG50 284 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 DIS3LQ8TF46 1054 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ABHD8Q96I13 439 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SPATA33Q96N06 139 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CLIC6Q96NY7 704 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PNMA5Q96PV4 448 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 RNPEPQ9H4A4 650 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 BLOC1S4Q9NUP1 217 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 NOL7Q9UMY1 257 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PCDHA12Q9UN75 941 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PHF24Q9UPV7 400 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 HPSEQ9Y251 543 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TANC1Q9C0D5 1861 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 DDX39AO00148 427 aaKnown RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 SPTLC2O15270 562 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 SORBS3O60504 671 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 GAS7O60861 476 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 LYPLA2O95372 231 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 BAG4O95429 457 aaKnown RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 C6orf222P0C671 652 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 SUPT20HL2P0C7V6 817 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 ZNF286BP0CG31 522 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 EN2P19622 333 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 RPA1P27694 616 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 MARCKSP29966 332 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 TECP42680 631 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 ACLYP53396 1101 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 PSMC6P62333 389 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 PLCB2Q00722 1185 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 KRT76Q01546 638 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 CEBPZQ03701 1054 aaKnown RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 GRB10Q13322 594 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 EPHA7Q15375 998 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 E2F4Q16254 413 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 FOXD4L6Q3SYB3 417 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 C1orf53Q5VUE5 145 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 CXCL17Q6UXB2 119 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 FOXD4L3Q6VB84 417 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 PLPPR4Q7Z2D5 763 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 SESTD1Q86VW0 696 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 DHX37Q8IY37 1157 aaKnown RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 LINC01465Q8N7H1 131 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 ANKLE1Q8NAG6 615 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 OR6J1Q8NGC5 347 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 SEPT1Q8WYJ6 367 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 VWCEQ96DN2 955 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 EPSTI1Q96J88 318 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 MTRQ99707 1265 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 TSEN34Q9BSV6 310 aaKnown RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 TEKT3Q9BXF9 490 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 CCSER1Q9C0I3 900 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 CSRNP2Q9H175 543 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 GDPD2Q9HCC8 539 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 DISC1Q9NRI5 854 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 RGL1Q9NZL6 768 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 DAXXQ9UER7 740 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-208ENST00000504788 PCDHA10Q9Y5I2 948 aa5.57□□□□□ -1.52
LMNB1-208ENST00000504788 TET1Q8NFU7 2136 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 IGKV6-21A0A0C4DH24 114 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 A0A1W2PQ45 241 aaPredicted RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 A0A1W2PQY0 241 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 MBLAC1A4D2B0 266 aaPredicted RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 TMEM150BA6NC51 233 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 MOXD2PA6NHM9 499 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 WDR64B1ANS9 1081 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms